Pseudomonas avellanae: BKM03_19670
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Entry
BKM03_19670 CDS
T05369
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pavl
Pseudomonas avellanae
Pathway
pavl02020
Two-component system
pavl02025
Biofilm formation - Pseudomonas aeruginosa
pavl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKM03_19670 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BKM03_19670 (fliA)
09142 Cell motility
02040 Flagellar assembly
BKM03_19670 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavl03021
]
BKM03_19670 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pavl02035
]
BKM03_19670 (fliA)
Transcription machinery [BR:
pavl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKM03_19670 (fliA)
Bacterial motility proteins [BR:
pavl02035
]
Flagellar system
Flagellar assembly proteins
Stator
BKM03_19670 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AVB21194
UniProt:
A0AAD0DXD3
LinkDB
All DBs
Position
complement(4127959..4128699)
Genome browser
AA seq
246 aa
AA seq
DB search
MNASGYQMYSKTSRNSQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDSTKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGDHEGLHEDGASGSLEPSRDLEDE
RFQAALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgagcggctaccagatgtacagcaagacctcccgtaattcgcagtacgagttg
atcgagcgttatgcgccgctggtcaagcgtatcgcttatcatctgctggcgcgcttgccg
gccagtgtgcaggtcgaggatctgatccaggccggcatgatcggtctgctcgaagtctcc
accaagtatgattccaccaagggagcgagtttcgagacctatgccggtattcgcattcgt
ggtgcaatgcttgatgaggttcgcaagggggactgggcacctcgctcggttcaccgcaat
acccgtatggtcagtgacgcaattcgcgcaattgaagctaaaaccggtcgtgacgctaaa
gatcacgaggttgcggccgaactccagttgagtcttgatgattattacgggattttgaat
gacaccttgggcagccgcctcttcagtttcgacgacctgctgcaggacggcgatcatgaa
gggctgcacgaggacggcgcaagcggttcgcttgagccgtcacgcgacctggaagacgag
cgcttccaggcagcgttggccgatgcaattgccaatttgccagagcgcgagcgtctggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggagaggttcttggtgtc
agcgaatctcgagtcagtcagttacacagccagtgcgcagctcgtttgcgagggcgtttg
ggggagtggcgagcgcgttga
DBGET
integrated database retrieval system
