Pseudomonas avellanae: BKM03_19790
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Entry
BKM03_19790 CDS
T05369
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pavl
Pseudomonas avellanae
Pathway
pavl02020
Two-component system
pavl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKM03_19790
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BKM03_19790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pavl02022
]
BKM03_19790
02035 Bacterial motility proteins [BR:
pavl02035
]
BKM03_19790
Two-component system [BR:
pavl02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
BKM03_19790
Bacterial motility proteins [BR:
pavl02035
]
Flagellar system
Flagellar assembly proteins
Others
BKM03_19790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA_2
AAA
HTH_20
HTH_30
MerR
FleQ
AAA_3
HTH_23
HTH_24
AAA_19
HTH_28
Sigma70_r4_2
nSTAND3
HTH_11
RsiG
AAA_22
AAA_7
ATPase
HTH_1
HTH_17
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AVB21217
UniProt:
A0AAD0GR77
LinkDB
All DBs
Position
complement(4149891..4151306)
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AA seq
471 aa
AA seq
DB search
MPINVLLVEDDRSLREALGETLELAGYGYQAVGSAEEALVAAEAQPFSLVISDVNMPGMD
GHQLLGLLRSRHPQLPVLLMTAHGAVDRAVDAMRQGAADYLVKPFEPKALIALVARHALG
RLGPAESDGPIAVEPASIQLLNLASRVAKSDSTVLISGESGTGKEVLARFIHQNSPRADK
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPMGLQA
KLLRVLQEREVERVGARKPIILDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWQA
LRQRTADILPLAERLLAKHVNKMKHAPVRLSAEAQQCLVSYPWPGNVRELDNAVQRALIL
QQGGVIQAQDFCLAGPVTSLPVAVPSEALPPQPVISSAENAGVCVGAESAGALGDDLRRR
EFQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEGYLFAT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcaatgtgctgttggtcgaggacgaccgttcgctgcgcgaggcgcttggggaa
accctggagctggccggttatggataccaggctgtcggctctgcggaggaggcgctggtc
gcggccgaggcgcagccgttcagtctggtcatcagtgacgtcaatatgccgggcatggac
ggtcatcaattattgggcctgttgcgcagtcggcatccgcaactgccggtactgctgatg
accgcccacggcgcagtcgatcgtgcggtcgatgccatgcgtcagggcgcggcagattat
ctggtcaagcctttcgagcccaaagccctgatcgcgctggttgcgcgtcatgcactgggg
cgcttggggcctgccgagagtgacgggccgatcgcggtcgaacccgccagcatccagttg
ttgaacctggccagtcgcgtggcgaaaagcgactccaccgtgcttatttccggcgagtcc
ggcacaggcaaagaggtactggcgcgtttcattcatcaaaattcgccgcgtgccgataag
ccttttattgcgatcaactgcgccgccatccccgacaacatgctggaagcgacgctgttc
ggtcatgaaaagggctcgttcaccggcgcaattgcggcgcaggcaggcaaattcgagcag
gcagacggcggcacaatcctgctcgacgagatttctgaaatgcccatggggctgcaagcc
aagctgctgcgcgtattgcaggagcgagaggtcgagcgcgttggtgcgcgcaagccgatc
attctggacattcgcgtagtggcaaccaccaaccgcgatctggccggtgaagtggcggcg
gggcgttttcgcgaggatttgttttaccggctttcggtatttccgctggcgtggcaggca
ttgcgtcaaaggactgccgatattctgccgttggccgagcgactgctggccaagcacgtc
aataaaatgaaacatgcgccggttcgtctttctgccgaggcgcagcagtgtctggtgagc
tacccgtggcccggcaacgtgcgtgaactggataacgccgtgcagcgggctttgattctg
cagcagggcggggtgatacaggcgcaggatttctgtcttgccgggccggtcaccagcctg
cctgtcgcggtgccgagcgaggctttgccccctcagcctgtcatctcttcggcagagaat
gccggtgtttgtgtaggtgctgaatcagccggggcgctgggtgatgacctcaggcgtcgt
gagtttcaaatgatcatcgacacgctgcgcgccgagcgcggtcgtcgcaaggaggcggcc
gaacggctgggtatcagcccgcgtacgttgcgttacaagctggcgcagatgcgcgacgcc
gggatggatgtcgagggttatctgtttgccacctga
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