Pseudomonas avellanae: BKM03_20345
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Entry
BKM03_20345 CDS
T05369
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
pavl
Pseudomonas avellanae
Pathway
pavl02010
ABC transporters
pavl02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BKM03_20345
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
BKM03_20345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pavl02000
]
BKM03_20345
Transporters [BR:
pavl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
BKM03_20345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
SBP_bac_11
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AVB21314
UniProt:
A0AAD0DXK3
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All DBs
Position
complement(4272964..4273878)
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AA seq
304 aa
AA seq
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MKMLPKTLCLLAVCITSGAPAFADTKPIRIGASFQEINNPYFVTMKNALEEASATIGAKL
IITDARHDVSKQVSDVEDMLQKGIDILLINPTDSVGVQSAVKSAHDAGVVVVGVDAQADG
PLDSFVGSKNFDAGFQACEYLASNIGDKGNIAILDGIAVVPILERVRGCKEAVAKHPDIK
IVSIQNGKQERDQALSVTENMLQAQPTLKGIFSVNDNGSLGALSAIEASGLDVKLVSVDG
APEAIKAILKPGSKFIATSAQYPRDQIRLALGIALAKKWGSQVPATVPVDILLVDQAKAK
SFSW
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcttccgaaaaccctgtgtttactggctgtctgcatcacctctggcgctccg
gcattcgccgataccaagcccatccgtatcggggcgtcattccaggaaatcaacaacccc
tatttcgtcaccatgaagaacgcactggaagaagccagtgcgaccatcggtgcgaaactg
atcatcaccgatgcacggcacgatgtttccaagcaggtaagcgatgtcgaagacatgctg
caaaaaggtatcgatatcctgctgatcaaccctactgattccgttggtgtgcaatcagcc
gtcaaatccgcacacgacgcgggtgtggtggtcgtcggggtcgatgcccaggccgatggc
ccactggactcattcgtgggctcgaagaacttcgacgccggctttcaggcttgtgagtac
ctggccagtaacatcggtgacaaaggcaacatcgctatccttgacggtattgccgtggtg
ccaatcctcgaacgtgtgcgcgggtgcaaagaggctgttgccaagcacccggacatcaag
attgtcagtatccagaacggcaagcaggaacgtgaccaggcgcttagcgtcaccgaaaac
atgctgcaggcccagccgaccctcaagggtattttcagcgtgaatgataacggctccctc
ggcgcgctttcggccatagaggccagtggcctggacgtcaaactggtgagcgtcgatggc
gcgccggaggcgatcaaggcgatcctgaagcctggaagcaaattcatcgccacctccgcc
caatatccccgcgaccagatccgactggccctgggcattgccttggcaaagaagtggggc
tcgcaagttcccgccaccgtgccggttgacattctcttggtggatcaggccaaagccaag
agcttcagctggtaa
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