Pseudomonas avellanae: BKM03_20995
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Entry
BKM03_20995 CDS
T05369
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pavl
Pseudomonas avellanae
Pathway
pavl03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BKM03_20995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pavl03011
]
BKM03_20995
Ribosome [BR:
pavl03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BKM03_20995
Bacteria
BKM03_20995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AVB21420
UniProt:
A0AAD0E0P2
LinkDB
All DBs
Position
complement(4388456..4390147)
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AA seq
563 aa
AA seq
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MSESFAELFEESLKTLNLQAGSIITAIIVDIDYQAGWVTVHAGLKSEGLIPLEQFHNDAG
ELTIKIGDEVHVALDAVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG
GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN
SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG
DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEE
GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS
GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV
ILSVDPERERISLGIKQLESDPFSEYVTVNDKGAIVRGIVKEVDAKGAIITLADDIEATL
KASEISRDRVEDARNVLKEGEEIEAKIISVDRKSRVISLSIKSKDVEDEKEAIQSLRSKP
EVAESTGPTTIGDLLRAQMEKQN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcagaactttttgaagaaagcctaaagaccctcaaccttcaggcc
ggttcgatcatcaccgctatcatcgttgatatcgactaccaggcaggttgggttacggtt
cacgccggtctgaaatctgaaggcctcatcccgctggaacagttccacaacgacgctggc
gagctgaccatcaagatcggtgatgaagttcacgttgcgctggacgcggtcgaagatggc
tttggcgaaaccaagctgtcccgcgaaaaagccaagcgtgccgagtgctggatcgttctg
gaagcggctttcgcagctgaagaagtggtcaagggcgttatcaacggtaaggttaaaggc
ggcttcactgtcgacgttaacggcatccgtgcgttcctgcctggttctctggttgacgtc
cgccctgtgcgtgacacgactcacctggaaggcaaagagctcgagttcaaggtcatcaag
ctggaccagaagcgcaacaacgttgtcgtttcccgtcgcagtgtcctggaagccgagaac
agtgccgagcgcgaagctctgctcgagtccctgcaggaaggccagcaagtcaagggtatc
gtcaagaacctcaccgattacggcgcattcgtcgatctgggtggcgtcgatggcctgctg
cacatcaccgacatggcctggaagcgtatcaagcatccatcggaaatcgtcaacgttggc
gacgagatcgatgtaaaggtcctgaagtacgatcgcgagcgcaatcgtgtttccctgggt
ctgaagcaactgggtgaagacccatgggttgctatcaaggctcgctacccggaaagcacc
cgcgttaccgcgcgtgttaccaacctgaccgactacggctgcttcgcagagctggaagaa
ggcgtggaaggcctggtacacgtttccgaaatggactggaccaacaagaacatccaccct
tcgaaagtcgttcaggttggcgacgaagtggaagtcatggttctggacatcgacgaagag
cgtcgtcgtatctccctcggcatcaaacagtgcaaatccaacccatgggaagatttctct
ggccagttcaacaagggcgataaaatctccggcaccatcaagtcgatcaccgatttcggt
atcttcattggtctggacggcggcatcgacggcctggttcacctgtccgacatctcctgg
aacgaagtgggcgaagaagccgtacgtcgcttcaagaagggcgacgagctcgacaccgtg
atcctgtcggttgatcctgagcgcgagcgcatctcgctgggtatcaagcagctggaaagc
gatccgttctccgagtacgtcactgtcaatgacaagggcgctatcgttcgcggtatcgtt
aaagaagttgacgccaaaggcgccatcatcaccctggccgacgacatcgaagcgaccctc
aaagcctccgaaatcagccgtgaccgcgttgaagacgcgcgtaacgttctgaaagaaggc
gaagagatcgaagccaagatcatcagcgttgaccgcaagagccgcgtaatcagcttgtcc
atcaagtcgaaagacgttgaagacgagaaagaagcgatccagagcctgcgtagcaagcct
gaagtcgctgaaagcactggtcctaccactattggtgacctgctgcgcgcgcaaatggaa
aaacagaactaa
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