Pseudomonas avellanae: BKM03_21020
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Entry
BKM03_21020 CDS
T05369
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavl03032
]
BKM03_21020
03400 DNA repair and recombination proteins [BR:
pavl03400
]
BKM03_21020
Enzymes [BR:
pavl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BKM03_21020
DNA replication proteins [BR:
pavl03032
]
Prokaryotic type
DNA Topoisomerases
BKM03_21020
DNA repair and recombination proteins [BR:
pavl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BKM03_21020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AVB21425
UniProt:
A0AAD0GPX9
LinkDB
All DBs
Position
complement(4394995..4397781)
Genome browser
AA seq
928 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVVLNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSA
VVEMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLGEYQ
EILAQIGELIRILNSATRLMEVIREELELIRAEYGDARRTEILDARLDLTLGDLITEEER
VVTISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMRKRADEEGEALEGELDD
AENSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALELDEGD
ILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEE
GSQILTASERGFGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEEIMLISD
QGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERVQEPSEVEGEELEGDEVVDGVI
VDVDVTNADEAGEDLQADAAPEEDEPQN
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaagcagtcc
tacctcgactacgcaatgagcgtaatcgtcggtcgagcactgcccgatgcgcgcgacggc
ttgaagcccgtgcaccggcgcgtgttgttcgcaatgagcgagctgggtaacgactggaac
aagccgtacaagaaatccgcccgtgtggttggtgacgtgatcggtaagtatcacccgcac
ggcgacaccgctgtgtacgacacaatcgttcgtatggctcagccattctcgctgcgctac
ctgctggtagacggccagggcaacttcggttcggtcgacggcgacaacgcggcggccatg
cgatacaccgaagtgcgcatgaccaagctggctcacgagctgctggccgacctgcacaaa
gagaccgtcgactgggtgccgaactacgacggcaccgaaatgatccctgcggtcatgccg
acccgtattcccaacctgctggtcaacggctcgagcggcatcgccgtgggcatggcgacc
aacattccgccgcataacctcggtgaagtcatcgacggctgtctggcgctgatcgacaac
cccgagttgacgatcgacgaactgatgcagtacatccccggcccggacttcccgacggcg
gcgatcatcaacggtcgcgccggcatcatcgaagcctatcgcaccggccgcgggcgtatt
tacatgcgtgcccgctccatcgtcgaagacatcgacaaggtgggcggtcgtcagcagatc
gtcatcaccgagctgccttaccagttgaacaaggcgcgtctgatcgaaaagatcgccgag
ctggtcaaggaaaagaaactcgaaggcatcaccgaactgcgcgacgagtccgacaaggac
ggtatgcgcgtggtcatcgagctgcgtcgtggcgaagtgcctgaggtcgtgctcaacaac
ctgtatgcccagacccagctgcagagcgttttcggtatcaacatcgttgccctgatcgac
ggtcgtccacgcatcctgaacctcaaggacttgctggaagccttcgtgcgtcaccgccgc
gaagtggtcacccgccgtaccgtgttcgagctgcgcaaggcgcgcgagcgtggccacatc
cttgaaggtcaggccgttgcgctgtccaacatcgatccggtcattgccctgatcaaggcg
tccccgacacctgccgaagccaaggaagcgctgatcaagacgccttgggaatcgagcgca
gtggtcgagatggtcgagcgcgccggtgccgattcgtgccgccccgagaacctcgatccg
caatacggcctgcgtgaaggcaagtatttcctgtcgccggaacaggctcaggccattctg
gaactgcgtctgcaccgcctgacaggtctggaacacgaaaaactgctgggtgagtaccag
gaaatcctggcccagatcggcgagctgatccgcatcctgaacagcgccacgcgcctgatg
gaagtgatccgcgaagagcttgaactgatccgcgccgaatacggcgatgcgcgtcgcacc
gagattctcgatgcacgcctggacctcaccctgggtgacctgatcaccgaagaagaacgc
gtggtcaccatctcccacggcggctatgccaagacccagccattggcggtctaccaggct
cagcgtcgcggcggcaagggcaagtcggccaccggtatcaaggatgaggactacatcgct
cacctgctggtcgccaacagccacaccacgctgttgatgttctccagcaagggcaaggtg
tactggctcaagacttacgagattccggaagcgtctcgcgctgcccgtggtcgtccgctg
gtcaacctgctgccgctgagcgaaggtgaatacatcaccaccatgctgccggtcgatctc
gaagccatgcgcaagcgtgccgacgaagaaggcgaagccctcgaaggcgagctggatgat
gcggaaaacagcagcgagaccgaagaagagcgcaaggcgcgcatcaaggctgcggacaag
aagaaggcgccattcatcttcatgtccacggccaacggcaccgtcaagaagactccactg
gtggccttcagccgtcagcgtagcgttggcctgattgcgctggaactcgacgaaggtgac
atcctgatttccgcagccatcaccgacggcgagcaggaaatcatgctgttctccgacggc
ggcaaggtcacccgcttcaaggaatccgacgttcgcgccatgggccgtacggctcgcggt
gtgcgcggcatgcgtctgccagaagggcagaagctgatttcgatgctgatcccggaagaa
ggcagccagattctcaccgcttccgagcgtggtttcggcaagcgtacggccatttccgag
ttccctgagtacaagcgtggcggtcagggcgtcatcgccatggtcagcaacgagcgtaac
ggccgtctggtcggcgcggttcaggtgctggatggcgaggaaatcatgctgatctccgac
cagggcacactggttcgtacccgcgtcggcgaagtctccagcctgggtcgtaacacccag
ggcgtgaccctgatcaagctggccagcgacgaaaaactggttggcctggagcgtgttcag
gagccgtcggaagtcgaaggcgaagagcttgagggtgacgaggtcgtcgatggcgtaatc
gttgatgtggacgtcaccaacgcagacgaggcaggtgaagacctgcaggcggacgcggcc
ccggaagaagacgaaccgcagaactga
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