Pseudomonas avellanae: BKM03_21490
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Entry
BKM03_21490 CDS
T05369
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavl03400
]
BKM03_21490
DNA repair and recombination proteins [BR:
pavl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BKM03_21490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AVB21502
UniProt:
A0AAD0GRB9
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All DBs
Position
4483616..4484098
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AA seq
160 aa
AA seq
DB search
MDNVSPSVRSRMMAGIKAKNTKPELKIRKLLHAAGYRYRLHHKKLPGKPDIVMPKYKLCI
FIQGCFWHRHQGCKYTTFPKSRVEFWEKKFRETVIRDSRNVSDLIQQGWRVFELWECGIK
NNDNELEEILFLITKKSINHFIWPNHQLDNNKSKSSEVRC
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggataacgtcagcccatcagtgcgttcacgaatgatggcaggtataaaagcaaaaaac
actaagcctgaactgaaaatccgaaaattgctacacgccgcagggtatcgctaccgacta
catcacaaaaaacttccaggaaagccagatattgtgatgccaaaatacaagctttgcatt
ttcattcaaggttgtttttggcacaggcatcaagggtgtaaatatacaacatttcccaaa
tccagagtggagttttgggaaaaaaaattccgcgaaaccgtaataagagactctcggaac
gttagtgatcttatccagcaaggatggcgtgtttttgagctgtgggagtgcggcattaag
aacaacgataatgagcttgaagaaatactttttctaataacgaaaaaatcaataaaccat
ttcatttggccaaatcatcagctagataacaataagtctaaaagcagcgaggttagatgt
taa
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