Pseudomonas avellanae: BKM03_22220
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Entry
BKM03_22220 CDS
T05369
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00061
Fatty acid biosynthesis
pavl00071
Fatty acid degradation
pavl01100
Metabolic pathways
pavl01212
Fatty acid metabolism
pavl02024
Quorum sensing
pavl04146
Peroxisome
Module
pavl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BKM03_22220
00071 Fatty acid degradation
BKM03_22220
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BKM03_22220
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM03_22220
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pavl01004
]
BKM03_22220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pavl04147
]
BKM03_22220
Enzymes [BR:
pavl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BKM03_22220
Lipid biosynthesis proteins [BR:
pavl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BKM03_22220
Exosome [BR:
pavl04147
]
Exosomal proteins
Exosomal proteins of breast milk
BKM03_22220
Exosomal proteins of breast cancer cells
BKM03_22220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AVB21615
UniProt:
A0AAD0E108
LinkDB
All DBs
Position
complement(4637233..4638921)
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AA seq
562 aa
AA seq
DB search
MQADFWDDKRPAGVDSNVDLQAYQSVIDVFERCCKKFADRPAFSNMGVTLTYAELDRHSA
AFAAYLQQHTQLMPGDRISVQMPNLLQYPIAVFGAMRAGLIVVNTNPLYTAREMRHQFKD
SGAKALVYLNMFGKLVQEVLPDTAIEHLIEVKMGDMQSAAKGWLVNTIVDKVKKLVPPFR
LPQAVGFKRALQLGRDSRVQKVAQKLDDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQVY
ACMRQERPEGGPVFEEGSEVMIAPLPLYHIYAFTANCMCMMISGNHNILITNPRDIAGFI
KELGKWKFTAMIGLNTLFVALMNHPDFKKLDFSALKSTNSGGTALVKATAERWAQITGCT
IVEGYGLTETSPVASANPYGALARLGTVGIPLPGTAMKVIDDEGVELAFGERGELCIKGP
QVMKGYWNRPDATAESLDAEGWFKTGDVAVIDAEGFVSIVDRKKDLIIVSGFNVYPNEIE
DVIMAHPKVANCACIGVPDERSGEAVKLFVVPRDPSVSVEELKAFCKENFTAYKVPKLIV
LRDSLPMTPVGKILRRELRDPA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatttctgggatgacaagcgtccggcgggtgtcgattccaacgtggatcta
caggcctatcaatcggtcatcgacgtgtttgaacgctgctgcaagaagttcgcggaccga
cctgcgttcagcaacatgggcgtgacccttacttatgccgagcttgatcgtcactcagcc
gcgttcgccgcttatctgcaacagcacacgcaactgatgccgggtgaccgtatctccgtg
cagatgcccaacctgctgcaatacccgattgctgtattcggtgcgatgcgtgccggtctg
atcgtggtcaacaccaacccgttgtacaccgcgcgtgagatgcgccatcagttcaaggac
tcgggtgccaaggcactggtctacctcaatatgtttggcaaactggtgcaggaagtgctc
ccggacaccgccatcgaacatttgattgaagtgaagatgggtgacatgcagtcggcggcc
aaggggtggctggtcaacaccattgtcgacaaggtcaagaagctggtccctccattccgg
ttgccccaggctgtcggcttcaagagagcactgcaactggggcgtgacagccgggtgcag
aaggtggcgcaaaagctcgatgacgtcgccgtgctgcaatacaccggtggcaccacgggg
ctggccaagggggcgatgctgacgcatggcaatctggtcgccaacatgcagcaagtctat
gcctgcatgcgccaggagcgtcccgagggtggtccagtgtttgaggagggctcggaggtg
atgattgcgccgctgccgctttatcatatctatgcattcacggcgaactgcatgtgcatg
atgatcagcggcaaccacaacatcctgattaccaacccgcgtgacatcgccggcttcatc
aaagaactcggcaagtggaagttcaccgcgatgatcggtctcaacacgctgttcgtggcg
ctgatgaaccatcccgatttcaaaaaactggatttctcggcgctgaaaagcaccaactcc
ggcggcactgcgctggtcaaggccacggccgagcgttgggcgcagatcaccggctgcacg
attgtcgaaggctacggcctgactgaaacgtcgcctgtcgccagcgccaacccttatggt
gcgctggcgcgtctgggcacggtcggtattccgttgcccggtacggccatgaaagtcatt
gatgacgagggcgtagagcttgcgttcggcgagcgcggcgaattgtgcatcaagggcccg
caggtcatgaaaggctactggaaccggcctgatgccaccgccgaatcgctggacgccgag
ggttggttcaaaaccggagacgtcgcggtgattgacgccgaagggttcgtcagtatcgtg
gatcgcaagaaggacctgatcatcgtgtccggtttcaacgtgtatcccaacgaaatcgaa
gacgtgatcatggcccatcccaaggtggccaactgcgcatgcatcggcgtgccggacgag
cgctccggcgaggcggtgaagctgtttgtcgtgccgcgtgatccaagcgtgagcgttgaa
gaactcaaggcgttctgcaaagagaatttcaccgcttacaaggtgcccaagcttattgtt
ctgcgcgattcgttgcccatgacaccggtgggcaagattttgcgcagggagcttcgcgac
ccggcctga
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