Pseudomonas avellanae: BKM03_23035
Help
Entry
BKM03_23035 CDS
T05369
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavl03009
]
BKM03_23035
Enzymes [BR:
pavl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BKM03_23035
Ribosome biogenesis [BR:
pavl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BKM03_23035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AVB21754
UniProt:
A0AAD0GR31
LinkDB
All DBs
Position
4806006..4806698
Genome browser
AA seq
230 aa
AA seq
DB search
MRLDRFLSNLPRFNRKSVRLALASGRVQVDGQITTDPHYDVREFSCVALDAEILQPGKAA
RYFMLHKPQGCVSATTDAQHATVLDLLDEPDKHELHIAGRLDFNTTGLMLITNDGQWSRR
LTQPQTKMPKVYYVETEQLIDERYALTFAEGLFFSFENIITQPAQLTVLGPRSARLSIIE
GRYHQVKRMFGHFDNKVLQLHRESIGALILDPALPPGGYRSLQAAETDLF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgatcgtttcctcagcaacctgccccgcttcaaccgcaagagcgtgcgcctg
gcactggccagcggcagggtgcaggtggacgggcaaatcaccacggacccgcattacgac
gtgcgtgagttcagttgcgtagcgttagatgcggaaatccttcagcccggcaaagccgcg
cgctacttcatgctgcacaagccgcaaggctgcgtcagcgcaacgaccgatgcgcagcac
gcaacagtgctcgatttgcttgacgagcctgacaaacacgaactgcacatcgccggacga
ctggacttcaacaccaccggcctgatgctgatcaccaacgacggtcaatggtcgcgacgg
ctgactcagccgcaaaccaaaatgcccaaagtgtattacgtcgagaccgagcaacttatc
gacgagcgctatgcgcttacattcgccgaaggtctgtttttctcattcgaaaacatcatc
acgcaaccggcacaattgaccgtgctggggccgcgaagcgcgcgcttgagcatcatcgaa
ggccgttaccaccaagtgaaacggatgttcggtcacttcgacaacaaagtgctgcaactg
caccgggaaagcatcggcgcgttgatcctcgacccggccctgccacccggcggctaccgc
tcgctgcaggctgcggaaacagacctgttttag
DBGET
integrated database retrieval system
