KEGG   Pseudomonas avellanae: BKM03_23250
Entry
BKM03_23250       CDS       T05369                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pavl  Pseudomonas avellanae
Pathway
pavl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BKM03_23250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pavl02022]
    BKM03_23250
Two-component system [BR:pavl02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   BKM03_23250
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA MDMPI_N AAA_2 MCM
Other DBs
NCBI-ProteinID: AVB21786
UniProt: A0AAD0GRQ2
LinkDB
Position
4846106..4847440
AA seq 444 aa
MLNSVIVVDDEAPIRQAVEQWLMLSGFEVQVFARAEECLAQIPEHFPGVVLTDVRMPGMT
GLQLLTHLHALDRDLPVILLTGHGDVPMAVEAMREGAYDFLEKPFSPETLISNLRRALEK
RQLVLENRRLLEQADVRTRLDATLLGVSPSLQTLRRQVLELSQLPVNVIIRGETGSGKEL
VARCLHDFGPRAGKPFVALNCAAIPEHLFEAELFGHESGAFTGAQGKRIGRLEYADGGTV
FLDEIESMPLAQQVKLLRVLQDKCLERLGSNQSIKVDLRIIAATKPDLLEEARAGRFRED
LAYRLNVAELRLPPLRDRLEDIAQLFSHFSRAAAERMGREVPALSAARLSQLLSHDWPGN
VRELANAAERQTLGLEMTPPQADTQLPGHSLAARQEAFEAQCLRASLTRHKGDIKAVLNE
LQLPRRTLNEKMQRHALVREMFLG
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgctgaactcggtcatcgtggtagacgacgaggcacctatccggcaagccgtcgaacaa
tggctgatgctgtcaggtttcgaggtgcaggtcttcgcccgcgccgaagagtgtctggcg
cagataccggagcatttcccgggcgtggtgctgaccgatgtgcgcatgccgggcatgacc
ggcctgcaattgctgacccatctgcacgcccttgaccgggacctgcccgtgattctgctg
accggccacggcgatgtgcctatggctgtagaggcaatgcgcgaaggtgcctatgatttt
ctggaaaagccattcagcccggaaacgttgatcagcaacctgcggcgcgcgctggaaaaa
cgccaactggtactggaaaaccgtcgcctgcttgaacaggccgacgtcagaacccggctg
gatgcaactctgctcggcgtatccccaagcctgcagaccctgcggcgccaggtgctggag
ttgtcgcaactgcctgtcaacgtgatcattcgcggcgaaaccggcagcggcaaagagctg
gttgctcgctgccttcacgacttcggcccgcgcgccggcaaacccttcgtagcactcaac
tgtgccgccatcccggaacacctgttcgaggccgagctgttcgggcacgaaagcggcgca
tttaccggcgcgcagggcaagcgtatcgggcggctggaatacgccgacggcggcacggtg
tttctcgatgaaatagagagcatgccgctggcgcaacaggtcaagctgctgcgcgtcctc
caggacaagtgccttgagaggctgggctccaaccagagcataaaggttgacctgcggatt
attgcggcgaccaaaccggacctgctcgaagaagctcgcgccgggcgcttccgcgaggac
ctggcctaccgcctgaacgtcgccgagttgcgcttgccaccgctgcgcgaccggcttgag
gacattgcgcaactattcagccatttcagcagggccgccgccgagcgcatgggacgtgag
gtgcccgccctgagcgccgcgcgcctgagccagttgctcagccatgactggcccggcaat
gtgcgcgaactcgccaatgcggccgagcggcagaccttgggcctggaaatgacaccaccg
caggccgacactcaactgccggggcattcactggcggcgcgtcaggaagcctttgaagcg
caatgtctgcgtgcctcactgacccgccacaaaggcgatatcaaggctgtgctcaacgag
ttgcaattgccccgacggacgctgaacgagaaaatgcagcgtcatgctctggtgcgggaa
atgtttctcggctga

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