Pseudomonas avellanae: BKM03_23800
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Entry
BKM03_23800 CDS
T05369
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00470
D-Amino acid metabolism
pavl00550
Peptidoglycan biosynthesis
pavl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BKM03_23800
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BKM03_23800
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pavl01011
]
BKM03_23800
Enzymes [BR:
pavl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BKM03_23800
Peptidoglycan biosynthesis and degradation proteins [BR:
pavl01011
]
Precursor biosynthesis
Amino acid ligase
BKM03_23800
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AVB21887
UniProt:
A0AAD0E0Z5
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Position
complement(4965408..4966754)
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AA seq
448 aa
AA seq
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MSLIVSDRFRIVVGLGKSGMSLVRFLANRGVSFAVADTRENPPELATLRRDYPQVEVRCG
ELDVDFLCRADELYVSPGLALATPALQQAHARGVKLSGDIELFARYAKAPVIAITGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLIGEGLPCWTFGLNKPD
FHGFGLREENGEKFLAFQFDNLMPVSELKVRGAHNQANALAALALGHAVGLPFDAMLASL
REFTGLEHRCQWLRERNGVDYYNDSKATNVGAALAAIEGLGSDIDGKLVLIAGGDGKGAD
FSGLRAPVAQYCRAAVLLGRDAELIAQALGDAVPLIRVDTVQAAAERSAELAQHGDAVLL
SPACASLDMFKNYEERGRVFAQAVECLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgatcgtttccgaccgcttccgcattgttgtggggcttggcaagagtggcatg
tccctggttcgcttcctggcgaaccggggcgtgtcctttgctgtggccgacacgcgggaa
aatcctcctgagctggcgaccctgcgtcgtgactatcctcaggtggaagtgcggtgtggc
gaactggacgtggacttcctctgccgtgccgacgagctctatgtcagccctggtctggcc
ttggccacgccggccttgcagcaggcgcatgcccgcggcgtcaagctgtccggcgacatc
gaactgttcgcccgttatgccaaggcaccggtgattgcgattaccggctccaacgcaaaa
agcaccgtcaccacgctggtcggcgagatggccgcagcagccggcaagcgtgttgctgtg
ggcggcaacctgggcaccccggcgctggacctgctcagcgatgatgtcgagctatacgta
atggagctgtccagttttcagctcgaaaccaccgaccagctcaatgctgaagtggcgacc
gtgctgaacatcagcgaagaccacatggaccgttattccggtctgccggcctatcacctc
gccaagcaccggattttccgtggcgcgcggcaagtggtggtcaatcggcaggacgcgctg
tcccgtccgttgatcggcgaaggcctgccttgctggacgtttggcctcaacaagcctgac
tttcacggctttggtctgcgcgaagagaacggcgaaaaattcctggcgttccagttcgac
aacctgatgccggtgagcgagctaaaagttcgcggcgcacacaatcaggccaacgcactg
gcagccctggcgctggggcatgccgtgggcctgccgttcgacgccatgcttgccagtctg
cgtgagttcaccggccttgaacaccgctgccaatggctgcgtgagcgcaatggcgtggat
tactacaacgattccaaggccactaacgttggtgctgcgctggcggctatcgaaggtctg
ggttcggacatcgacggcaagctggtgttgatcgccggtggcgatggcaaaggtgccgac
ttcagcggcctgcgtgcccccgtggcgcaatattgccgcgctgcggtgttgctgggtcgc
gatgccgagctgattgcccaggcgctgggtgatgccgtgccgctgattcgtgtcgacacg
gtacaggcggctgccgagcgcagcgccgagcttgctcagcatggcgatgccgtgttgctt
tcccctgcatgcgccagtctggacatgttcaagaattatgaagagcgcggacgtgtgttc
gcgcaggcagtggagtgcttgtcatga
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