Pseudomonas avellanae: BKM03_24205
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Entry
BKM03_24205 CDS
T05369
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pavl03016
]
BKM03_24205
Enzymes [BR:
pavl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BKM03_24205
Transfer RNA biogenesis [BR:
pavl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BKM03_24205
Prokaryotic type
BKM03_24205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AVB21965
UniProt:
A0A261WIF6
LinkDB
All DBs
Position
complement(5042293..5043210)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGKTTTTGDSEGDVLLTRPVTVGRDDIEAVLPDFRGKIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGETARLSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVSEDGRVAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgtcgcaatgtcagcgggatcatcctgctcgacaagcct
ctgggcttcacgtccaacgccgctctgcaaaaggttcgctggctgctcaatgccgagaag
gccgggcacacgggcagccttgatcctttggcaaccggcgttctgccgttgtgctttggc
gaggcgaccaagttctctcagtatctgctcgattcggacaagtcctacgagacgctggcc
caactgggcaagaccacgaccactggcgactccgagggcgatgttttactcacgcgtccg
gtgaccgttggtcgcgatgatatcgaagcggttctgcccgatttccgcgggaaaatcagc
cagatacctcccatgtactcggccctcaagcgtgacgggcagccactttacaaactggcg
cgtgcaggggaagtagtggagcgcgagccccgttctgttactattgcgcgcctagagcta
cttgcttgcgaaggcgagacagcacgtctgtcggtggattgcagtaaaggcacctatatc
cgcacgctggtcgaggatatcggtgaaaaactcggttgtggtgcctacgtcgcagaactg
cgccgtacccaggccgggcctttcacgctggctcagacggttacgctggaagagctcgag
caagtgcacgccgacggtggcaacgaagcggttgaccgcttcctgatgccttcggacagc
ggcctgctggactggccgttgctgaagttttccgagcacagttcgttttactggttgcat
ggccagccggtacgcgccccggacgcaccgaaattcggtatggtacgggtgcaggatcac
gaaggtcgcttcatcggtatcggtgaagtcagcgaagacgggcgtgttgcgccgcgtcga
ttgattcggtcagagtga
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