Pseudomonas avellanae: BKM03_24220
Help
Entry
BKM03_24220 CDS
T05369
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavl03021
]
BKM03_24220 (nusA)
03009 Ribosome biogenesis [BR:
pavl03009
]
BKM03_24220 (nusA)
Transcription machinery [BR:
pavl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BKM03_24220 (nusA)
Ribosome biogenesis [BR:
pavl03009
]
Prokaryotic type
rRNA transcription factors
BKM03_24220 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AVB21968
UniProt:
A0A261WHR9
LinkDB
All DBs
Position
complement(5046343..5047824)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPASVIFEALELALATATKKRFEDEVELRVEINRQTGNYETFR
RWTVVEDEDLDDPAYELAVDQAQAKKPGAVAGDLIEEKIDSIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
VRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIEELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVVTREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtgtccaatgaaaagggcgttccggca
agtgttatttttgaagcgctggagctggctctggccactgctaccaagaaacgttttgaa
gacgaagttgagctgcgtgtagagatcaaccgccaaacaggcaattacgagactttccgt
cgctggacagtcgtcgaagacgaagatctggacgatcctgcttacgagctggccgtcgat
caggctcaggctaaaaagccgggtgccgttgcaggcgatctgatcgaagagaaaatcgat
tccatcgaatttggtcgtattgctgcacagactgcaaaacaggtcatcgtgcagaaagtt
cgtgaagccgagcgtgctcaggtagtcgatgcctaccgtgagcgtctgggtgaaatcatt
tctggtactgttaaaaaggttacacgtgacaatgtcatcgttgacctgggtaacaatgcc
gaagccttgctggctcgtgaagacatcatttcccgggaaactttccgggtcggtgttcgc
gtccgtgctttgctgaaggaaattcgcactgaaaaccgtggccctcagttgattctgtcg
cgtactgcgccagagatgctgatcgagcttttccgcattgaagtgccggaaattgccgaa
ggtctcatcgaggtgatggctgcctctcgtgacccgggttctcgtgcgaaaatcgctgtt
cgctccaaggacaaacgaatcgatccgcaaggtgcctgtatcggcatgcgcggttcgcga
gttcaggctgtttccggcgagctgggtggcgagcgtgtggatatcgtgctttgggacgat
aaccctgcgcagttcgtgatcaacgcaatgtcccctgcagaagtagcggcaatcatcgta
gatgaagacgcccacgcaatggacatcgcggtaggcgcggacaacctggcccaggctatt
ggtcgtggcggtcagaacgtgcgtctggccagtcagttgactggctggaccctgaacgta
atgaccgaatcggacatccaggccaagcagcaagctgaaaccggtgacatcctgcgcaac
ttcatcgaagagctcgaagtcgatgaagaactggctcaggtgctggttgatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagatatcgtcaacgagcttcgcgctcgtgccaaggatcgtttgttgactaaagcc
atcgctacagaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtagttacccgcgaagac
ctggccgagcagtctatagatgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
DBGET
integrated database retrieval system
