Pseudomonas avellanae: BKM03_24280
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Entry
BKM03_24280 CDS
T05369
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00220
Arginine biosynthesis
pavl00240
Pyrimidine metabolism
pavl00250
Alanine, aspartate and glutamate metabolism
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
pavl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BKM03_24280 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BKM03_24280 (carB)
00220 Arginine biosynthesis
BKM03_24280 (carB)
Enzymes [BR:
pavl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BKM03_24280 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AVB21978
UniProt:
A0AAD0GQ26
LinkDB
All DBs
Position
complement(5055921..5059142)
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM
ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA
DTIDKAEDRSRFDKAMKSIGQACPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM
NPRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLP
RFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDPKLDLSHPES
MSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLVKDEEKIKTLG
LSAIDRDLMYRLKRKGFSDARLAKLVGVTEKNLRTHRHKLDVFPVYKRVDTCAAEFATDT
AYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPRGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAAAKIGYPLVVRPSYVLG
GRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQH
IEQAGVHSGDSACSLPPYSLPAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIE
VNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEIIPNFYSVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVEAVA
RDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQ
SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacattaaaagcatcctgattctcggcgccggccccatcgtgatc
ggccaggcctgtgaattcgactactccggcgcccaggcttgcaaagccctgcgcgaagag
ggttaccgcgtcatcctggtgaactccaacccggcgaccatcatgaccgacccggccatg
gccgacgccacctacatcgagccgatcaagtggcagactgttgccaagatcatcgagaaa
gagcgcccggacgcgttgctgccaaccatgggtggccagaccgcactgaactgcgcactg
gatctggagcgtgaaggcgttctggagaagttcggcgtcgagatgatcggtgccaacgcc
gacaccatcgacaaggctgaagaccgttcgcgtttcgacaaggccatgaagtccatcggc
caggcgtgcccgcgttccggcatcgcgcacagcatggaagaagccaacgcggttcttgaa
aaactcggtttcccttgcatcatccgcccgtcgttcaccatgggtggcacaggcggcggt
attgcctacaaccgtgaagagttcgaagaaatctgcgcccgtggtctggacctgtctccg
accaaggaactgctgatcgacgaatcgctgatcggctggaaagagtatgaaatggaagtt
gtccgcgacaaaaaggacaactgcatcatcgtctgttccatcgaaaacttcgacccgatg
ggtgtgcacaccggtgactccatcaccgttgccccggcacagaccctgaccgacaaggaa
tatcagatcctgcgtaacgcctcgctggcggtactgcgcgagatcggcgttgaaaccggt
ggttccaacgttcagttcggcatctgcccggacaccggccgtatggtcgtcatcgagatg
aacccgcgcgtgtcgcgttcctcggcgctggcttccaaggcgaccggcttcccgattgcc
cgggtcgcggccaagctcgcagtgggttacacccttgacgagctgtccaacgaaatcacc
ggcggcaagaccccggcgtccttcgagccgtccatcgactacgtcgtcaccaagctgccg
cgcttcgcttttgagaagttcgccaaggccgatgcgcgcctgaccacacagatgaagtcg
gtcggtgaagtcatggccatcggccgtaccttccaggaatccctgcagaaagccctgcgc
ggcctggaagtcggcgtgtgtggtcttgatccgaagctggacctcagccatccggaaagc
atgagcacgctcaagcgcgagctgaccgtgccgggtgccgagcgtatctggtacgtcgcc
gatgcgttccgcgcaggcatgacggtcgaagaaatcttcgccatgaacatgatcgacccc
tggtttctggtccagatcgaagatctggtcaaggacgaggaaaagatcaagacgcttggc
ctgtcggcaatcgatcgcgacctgatgtaccgtctcaaacgcaagggcttctccgatgca
cgcctggccaagctggtcggcgttaccgagaaaaacctgcgcacgcaccgtcacaagctg
gatgtgttcccggtctacaagcgcgtcgacacctgcgcggccgagtttgcaaccgacacc
gcgtacctgtactcgacgtacgaagaagagtgcgaagccaacccttcgacgcgcgacaag
atcatgatcctcggcggtggccctaaccgtatcggccaaggtatcgagttcgattactgc
tgcgtgcacgcagccctggcgctgcgtgaagacgggtacgagaccatcatggtcaactgc
aacccggaaaccgtctccaccgactacgacacctctgatcgtctgtactttgagccggtt
actctggaagacgtactggaaatcgtgcgcgtcgagaagcccaggggcgtgatcgtgcag
tacggcggccagaccccgctgaaactcgcccgtgccctggaagccgctggcgtgccgatc
atcggcaccagcccggatgccatcgaccgtgcagaagaccgcgagcgcttccagcagatg
gtcgagcgtctcaacctgcgtcagccgccaaacgccaccgtgcgcagcgaagacgaagcg
attcgtgctgccgccaagatcggttatccgctggtcgtgcgtccgtcctatgtactgggc
ggccgggcgatggaaatcgtttaccaggaagacgagctcaagcgttacctgcgtgaggca
gttcaggtgtccaacgacagcccggtgctgctcgaccacttcctgaattgcgccatcgaa
atggacgtcgatgcagtctgcgacggtactgacgtggtgatcggcgcgatcatgcagcac
atcgaacaggcgggcgttcactccggtgactccgcatgctccttgccgccatactcgctg
cctgctcacatccaggatgagatgcgcgaacaggtcaagaagatggccttggagttgggt
gttgtcggcctgatgaacgtacagctggcacttcagggtgaagacatctacgtcatcgaa
gtgaacccgcgtgcatcgcgtaccgtgccgttcgtttccaagtgcatcggtgtttccctg
gccatgatcgcagcgcgcgtgatggcgggtaaaaccctgaaagagctgaattttaccaag
gaaatcattcctaacttctacagtgtgaaagaggcggtgttcccgttcgccaaattccct
ggcgttgacccgatccttggcccggaaatgaagtcgaccggcgaagtgatgggcgtgggc
gacaccttcggtgaagcgtttgccaaggcccagatgggcgccagcgaagtgctgccgacc
ggcgggactgcgtttatcagcgtacgtgatgacgacaagccactggttgaagcggttgct
cgtgacctgatcaacctgggtttcgagattgttgctacagctggaacggccaagctgatc
gaagcggccggcctgaaagtgcgtcgcgtcaacaaggtgaccgaaggtcgcccgcacgtg
gtcgacatgatcaagaatgacgaagtcaccctgatcatcaacaccaccgaaggccgtcag
tcgatcgctgattcctactccatccgtcgcaatgccttgcagcacaagatttactgcacc
actaccattgcagcaggcgaagcgatctgcgaagcgctcaagttcggtccagagaagacc
gtgcgtcgcttgcaggacctccatgcaggattgaaggcatga
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