Pseudomonas avellanae: BKM03_24915
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Entry
BKM03_24915 CDS
T05369
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00260
Glycine, serine and threonine metabolism
pavl00460
Cyanoamino acid metabolism
pavl00630
Glyoxylate and dicarboxylate metabolism
pavl00670
One carbon pool by folate
pavl00680
Methane metabolism
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
pavl01120
Microbial metabolism in diverse environments
pavl01200
Carbon metabolism
pavl01230
Biosynthesis of amino acids
pavl01240
Biosynthesis of cofactors
pavl04981
Folate transport and metabolism
Module
pavl_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BKM03_24915 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BKM03_24915 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BKM03_24915 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BKM03_24915 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BKM03_24915 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BKM03_24915 (glyA)
Enzymes [BR:
pavl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BKM03_24915 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AVB22078
UniProt:
A0A261WMM1
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All DBs
Position
5189128..5190381
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDGNGMIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGSQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICAKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactatcgccaagtacgacgccgatctgtttgccgccatggag
caagaagctctgcgtcaagaagaacacatcgagctgatcgcctcggaaaactacaccagt
ccggccgtcatggaagctcaaggctcggtactgaccaacaagtacgctgaaggctaccca
ggcaagcgttactacggcggctgcgagtacgtcgacgttgtcgagcaactggccatcgac
cgtgccaaagagttgttcggcgccgattacgccaacgtccagccacacgccggttcgcaa
gccaactcggcggtctacctggctctgctgcaaggcggcgacaccattctgggcatgagc
ctggctcacggcggtcacttgacccacggtgccagcgtttcgtcctccggcaagctgtac
aacgctgttcagtacggcatcgacggcaacggcatgatcgactacgacgaagtcgagcgc
ctggctgttgaacacaagccaaaaatgatcgttgccgggttctctgcctactcgcagatc
ctcgacttcccgcgcttccgtgccatcgccgacaaggtcggtgcctacctgttcgttgat
atggcgcacgtagccggtctggttgccgcaggtgtctacccgaacccggtgccgttcgcc
gacgtcgtcaccaccaccacgcacaaaaccctgcgcggtccacgtggcggtctgatcctt
gcgcgcgccaacgccgacatcgagaagaagctgaattccgccgtattccctggctcccag
ggcggtccgctggagcacgttatcgcagccaaggccatctgtttcaaggaagcgctgcag
cctgagttcaagacctaccagcaacaagtggtcaagaacgccaaggcaatggccggtgtg
ttcatcgagcgcggtttcgacgtagtgtccggcggtactgaaaaccacctgttcctgctc
tcgctgatcaagcaggacatctccggtaaagacgccgacgccgccctgggtcgcgccttc
atcaccgtcaacaaaaactcggtacccaacgacccacgttccccgttcgtcacctccggc
ctgcgcttcggcaccccggcagtgaccactcgcggcttcaaggaagcagagtgcaaggaa
ctggccggctggatctgcgacatcctggcggacctgaacaacgaagccgtgattgacgct
gtgcgcgagaaggtcaaggccatctgcgcgaagctgccggtttacggcgcttga
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