KEGG   Pseudomonas avellanae: BKM03_25070
Entry
BKM03_25070       CDS       T05369                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pavl  Pseudomonas avellanae
Pathway
pavl03030  DNA replication
pavl03430  Mismatch repair
pavl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BKM03_25070
   03430 Mismatch repair
    BKM03_25070
   03440 Homologous recombination
    BKM03_25070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pavl03032]
    BKM03_25070
   03400 DNA repair and recombination proteins [BR:pavl03400]
    BKM03_25070
Enzymes [BR:pavl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BKM03_25070
DNA replication proteins [BR:pavl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BKM03_25070
DNA repair and recombination proteins [BR:pavl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BKM03_25070
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AVB22105
UniProt: A0A3M5T3G2
LinkDB
Position
complement(5219816..5220430)
AA seq 204 aa
MLERVAVIDFETTGISPNPGCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGI
SNNMIRTAPSAERVMGDVADFVGSTPLVAHNASFDQKFWDYELSRIQRKREQSFACSMLL
ARRLMPGAPNHKLGTLTSYARLPNTGKAHRAMADAEMAANLTAYLTNELRNTHGIAGISH
QMLCSLQKVPAAKIGETLKRQRGF
NT seq 615 nt   +upstreamnt  +downstreamnt
gtgttggaacgtgttgcagtcatcgactttgaaaccaccggaatctctccgaatccgggt
tgccgggcgaccgagattgccgtggtcatcatggagcaggggcgtatcgtcgagcgcttt
cagagcctgatgaacgctggcgtgcgcattccggcattcatcgaagggctgaccggtatc
agcaacaacatgattcgcaccgcccccagcgccgagcgggtgatgggtgatgtggcagac
tttgtcggctcgacgccgctggtggcgcacaatgcctcgtttgaccagaagttctgggat
tacgaactgtcgcgcatccagcgcaagcgcgaacaaagctttgcctgttcgatgctgctg
gcccgacgcctgatgcccggcgccccgaatcacaagctcggcacattgaccagctacgca
cgcctgcccaacaccggcaaggctcaccgggcgatggccgatgctgaaatggctgccaac
ctgacggcgtacctgaccaacgaactgcgcaacacccacggtatcgccgggatctctcac
cagatgctgtgctcgctgcagaaagtcccggccgcaaaaatcggcgaaacgctcaagcgt
cagcgcggcttttga

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