Pseudomonas avellanae: BKM03_25190
Help
Entry
BKM03_25190 CDS
T05369
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavl03009
]
BKM03_25190
Enzymes [BR:
pavl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
BKM03_25190
Ribosome biogenesis [BR:
pavl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BKM03_25190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
Motif
Other DBs
NCBI-ProteinID:
AVB22122
UniProt:
A0AAD0GRV9
LinkDB
All DBs
Position
complement(5240385..5241017)
Genome browser
AA seq
210 aa
AA seq
DB search
MPRTQRPVSRRPAPNPSGAARRVAKAPPAEPKLILFNKPFDVLTQFSDEEGRATLKDFIK
IPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPTPEQLQQLRDG
VQLNDGPTLPAEARQLDEPQLWPRNPPVRFRKSVPTSWLELVIKEGRNRQVRRMTAAVGL
PTLRLVRVRIGDWTLDGLDQGQYREVAAKL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcacccaacgccccgtttcccgtcgtcctgcgcccaacccgtcaggcgctgcc
cgccgtgtcgccaaagcgccaccggccgagccgaagctgattctgttcaacaagcctttt
gatgtattgactcagttcagtgacgaggaaggccgggccacgctcaaggacttcatcaag
atccccggcatttaccccgcaggccggctggaccgtgacagtgaaggcttgttgctgctg
accaatgatggccagttgcaggcgcggattgccgacccaaaacacaagctggccaagacg
tattgggtgcaggtcgagggtgagccaacgccagagcagttgcagcagttgcgcgacggc
gttcagcttaatgacggcccgaccttgcccgccgaggcgcggcagcttgatgagccgcag
ctctggccgcgcaacccgccggtgcgctttcgcaagagcgtgccgaccagttggctggaa
ctggtcatcaaggaaggccgcaaccgtcaggtacggcgcatgaccgccgcagtcgggcta
cccaccttgcggctggtgcgggtcaggattggcgactggacgctggatggtctggaccag
ggccaataccgggaagtcgctgcaaagctgtga
DBGET
integrated database retrieval system
