Pseudomonas avellanae: BKM03_26175
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Entry
BKM03_26175 CDS
T05369
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00540
Lipopolysaccharide biosynthesis
pavl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BKM03_26175
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pavl01005
]
BKM03_26175
Enzymes [BR:
pavl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
BKM03_26175
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
BKM03_26175
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
BKM03_26175
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
BKM03_26175
Lipopolysaccharide biosynthesis proteins [BR:
pavl01005
]
Lipid A
BKM03_26175
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
IL5
Epimerase_2
DUF2300
Motif
Other DBs
NCBI-ProteinID:
AVB22297
UniProt:
A0AAD0GS90
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All DBs
Position
complement(5451168..5452448)
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AA seq
426 aa
AA seq
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MNRTLYTVLFHLGLPLVALRLWLRARKAPAYRQRIGERFASGLPVMQRGGIWVHAVSVGE
SIAAAPMIRALLAQYPQLPITVTCMTPTGSERIKALFANEPRIQHCYLPYDLPWAAGRFL
DHVQPRLGIIMETELWPNHIHQCAKRAIPVVLANARLSERSARGYARFARLTQPMLAEMA
WFAVQTEVEAQRFRDLGARPECVAVTGSIKFDLSIDPHLLERAAQLREQWQATQRPVWIA
ASTHAGEDESVLSAHRTLLASHPDALLILVPRHPERFDSVHALCQEQGFKTVRRSSAQAV
TPDVAVLMGDTMGELLFLYALADIAFVGGSLVPNGGHNLLEPAALAKPVLSGPHLFNFLE
IAAMLRTAGALQEVGDATALAAALQHLIAHPQEARSMADAGLAVMKANQGALQRLLDGIG
RLMARR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaactctttataccgtgctgtttcatctcggcctgcccttggtcgccctgcgc
ctgtggttgcgtgcgcgcaaggccccggcgtatcgccagcgcatcggcgagcgtttcgcc
agcggcctgcctgttatgcagcgcggcggtatctgggtgcatgcggtgtcggtgggcgag
agcatcgccgccgcgccgatgattcgcgcgctgctggcgcagtatccgcaactgccgatc
actgtgacttgcatgacgcccacaggttcggagcgaatcaaggcgctgtttgccaacgag
ccgcgtattcagcactgttacctgccgtatgacctgccgtgggcggccgggcgttttctc
gatcatgtgcagcctcggctgggcatcatcatggaaaccgagttgtggcccaaccacatt
catcaatgtgcgaaacgcgcaattcccgtggtgctggccaatgcgcgactgtcggaacgc
tcggcgcggggctatgcccgtttcgccaggctgacgcagccaatgctggccgaaatggcc
tggtttgcggtgcagactgaagtggaagcgcagcgctttcgtgatctgggtgcgcgaccg
gagtgtgttgcggtgacgggctcgatcaagttcgacctgagcatcgacccgcacctgctg
gagcgcgctgcgcaactgcgcgaacaatggcaggcgacgcagcgcccggtgtggatcgca
gccagcacccatgcgggcgaggatgaaagcgttctttccgctcatcgcactttgctggcc
agccatcccgatgcgctgttgattctggtgccgcgccatcccgaacgtttcgacagcgtg
catgcgctgtgtcaggagcagggtttcaaaacggttcgacgctcctccgcgcaggccgtc
acgccagatgttgcggtgctgatgggcgataccatgggcgagttgctgtttctttacgcg
ctggccgacatcgctttcgtaggtggcagcctggtgcccaacggcgggcacaacctgctg
gagcccgcggcgctggccaagcccgtactgagcggcccgcacctgttcaacttccttgag
attgccgcaatgctgcgcactgcgggtgctctacaggaagtgggcgatgcaactgcgcta
gcggctgcgcttcagcatctgatcgcccatccgcaagaagctcgcagcatggccgatgcc
gggctggcagtgatgaaggccaatcagggtgccttgcaacgcttgctggacgggatcgga
cggttgatggccaggcgctga
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