Pseudomonas avellanae: BKM03_28630
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Entry
BKM03_28630 CDS
T05369
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00521
Streptomycin biosynthesis
pavl00523
Polyketide sugar unit biosynthesis
pavl00525
Acarbose and validamycin biosynthesis
pavl00541
Biosynthesis of various nucleotide sugars
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
pavl01250
Biosynthesis of nucleotide sugars
Module
pavl_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BKM03_28630 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BKM03_28630 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BKM03_28630 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BKM03_28630 (rfbB)
00525 Acarbose and validamycin biosynthesis
BKM03_28630 (rfbB)
Enzymes [BR:
pavl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BKM03_28630 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AVB23282
UniProt:
A0AAD0M745
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All DBs
Position
5965222..5966304
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AA seq
360 aa
AA seq
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MRILVTGGAGFIGSALIRHLINNTEHDVLNFDKLTYAGNLESLQSIASNTRYEFVQADIC
DQAKVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEAARAYWLKLPD
VERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP
VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT
EGDVGETYNIGGHNEQKNIDVVRGICSLLDELAPQHPDGVQHYSDLITYVVDRPGHDQRY
AIDASKIDNELGWTPEETFESALRKTVQWYLDNLDWCRRVQDGSYQGQRLGFTDSKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatactcgtcaccgggggcgcgggcttcatcggctccgcactgatccgccatctg
ataaacaacaccgaacacgacgtgctgaacttcgacaaattgacctacgccggcaacctt
gagtcgttgcagtcgattgcgagcaacacgcgttatgaattcgtgcaggctgacatctgc
gatcaggccaaggtcagtgcagtgctggagcggttcgctccccaggcgatcatgcacctg
gcggccgagtcccacgtagaccgttccattgatggccctgccgagtttgtgcagaccaat
atcgtcggcacttacagcctgctggaggccgcgcgcgcctactggttgaagctgccggac
gtcgagcgtcaggcgttccgctttcaccatatttccaccgacgaagtgtacggcgacctg
cacggtgtcgatgatctgttcacagaaaccacaccctatgcgcccagctcgccttactcc
gcgagcaaggctgcgtccgatcacctggttcgcgcctggcatcgcacttatggcctgccg
gtggtggtgactaactgttccaacaattacgggccgttccacttccccgaaaagctcatc
ccgctggtgattctcaacgcgctggcgggcaagccgctgccggtatacggcaacggcctg
caagtgcgcgactggctgtacgtcgaagaccacgcgcgcgcgttgctcaaggtcgtgacc
gaaggcgacgtcggtgagacgtacaacatcggtggccataacgagcagaagaacatcgat
gtggtgcgcggcatctgctcactgctcgacgagctcgccccgcagcacccggacggcgtg
cagcattacagcgacctgatcacctacgtggtggatcggccgggccacgatcagcgctat
gccatcgatgccagcaagatcgacaatgagttgggctggacacctgaagaaaccttcgaa
tccgcgctgcgcaagaccgtgcagtggtacctggacaacctggattggtgccgccgggtt
caggacggcagttatcagggccagcgactgggttttactgattcaaaagacctgattgcc
tga
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