Pseudomonas avellanae: BKM03_30470
Help
Entry
BKM03_30470 CDS
T05369
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavl03032
]
BKM03_30470
03036 Chromosome and associated proteins [BR:
pavl03036
]
BKM03_30470
03400 DNA repair and recombination proteins [BR:
pavl03400
]
BKM03_30470
DNA replication proteins [BR:
pavl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BKM03_30470
Chromosome and associated proteins [BR:
pavl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BKM03_30470
DNA repair and recombination proteins [BR:
pavl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BKM03_30470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
SSPI
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AVB23387
UniProt:
A0AAD0M773
LinkDB
All DBs
Position
p1_tig4:complement(96029..96334)
Genome browser
AA seq
101 aa
AA seq
DB search
MALTKDQFIAVIAEAIDAPKNTTGKALEQLGQIVADQLGNGAEITLPGIGKLKVAERPAR
TGRHPSTGAAIEIAAKKVIKFVPAKVLNDAINNGAPQKKGL
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctctgactaaagaccaattcatcgccgttatcgcagaagctatcgacgcgccaaaa
aacaccacgggtaaggctcttgagcaattgggacagatcgttgccgaccagctgggcaac
ggtgcagaaatcactctaccgggcatcggcaaactgaaagtggcagagcgcccagcccgc
actggccgccacccttcgactggcgccgccatcgaaatcgctgccaagaaagtcatcaag
ttcgtcccggccaaggtgctgaacgacgcgatcaacaacggtgcgcctcagaaaaagggg
ttgtaa
DBGET
integrated database retrieval system