Pseudomonas avellanae: BKM03_30580
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Entry
BKM03_30580 CDS
T05369
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00040
Pentose and glucuronate interconversions
pavl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BKM03_30580
Enzymes [BR:
pavl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
BKM03_30580
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
AVB23482
UniProt:
A0AAD0GUF2
LinkDB
All DBs
Position
p2_tig5:9989..11587
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AA seq
532 aa
AA seq
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MAAGQKYVACTFRHVFWIATSVGISLTVTLPTQAASDAAVVTSWGRVSEPSSPPVCKQIQ
ATLTPRNGSLDSVDSAALDSRPDQDRIQSAINGCAAGQAVQLVKGADNNSAFLSGPLQLK
SGVTLWIDDGVTLFASRNPKDYDNGKGTCGVTTVANQDACSSLISAKNTHASGVIGKGVI
DGRGGSLLTAGANANLRSWWDLVYQKTLSNIYQQKPRLIQVSGGTDFVIHGLTLQNAPDF
NIVTDGVTGVTVWGIKILTPSRVYTVEGYRCPTGSTPDQKTPGTCFTPETVKNTDGFDPG
QSNKVLLAYSYISTGDDNVAIKSSRTSGSRDLMFAHNHFYYGHGLSIGSETNGGVHNVSV
VDLAADGADSQDGIGLRIKSGAKSGGTVDSVSYANICMRNVKFPLVFDTNYGSVGGTSYP
DFSGITVKGFHYLGSQRFGGGKTTFVGYNDNGQKRPISITLDNVVFDGTQPSFTGLTSTH
FILGPGPVSFANKLVPSIKDDVTVSGSPGNGTPVDCTAAFVPMKSVVPEAPF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
attgcagcggggcaaaaatacgttgcctgcacgtttcggcacgtattctggatagccact
tccgtgggtatttcgcttactgtcactttacccacgcaggcggccagcgacgctgcagta
gtcacgtcctggggcagggtaagcgagccatccagtccgccagtttgcaagcagatccag
gccacgctaacacccaggaatggctcactggacagtgtcgacagtgcggcgctcgactcc
cgacctgaccaggacagaatccagagcgcaatcaatggctgcgcagcggggcaagctgtc
cagttggtcaaaggggcagacaacaactcggcgttcctcagcggtcctttgcagttgaaa
tcaggagttacgctctggatcgatgatggcgttacgctcttcgcgtcacgcaaccccaag
gactacgacaacggcaagggcacttgcggcgtaacgacggtcgccaatcaggacgcctgc
agctcactgatttcggcaaaaaacacccacgccagcggtgtcattggcaaaggcgtcatt
gatggacggggcggcagcctgctgaccgccggtgcaaatgccaacctgcgcagctggtgg
gaccttgtttaccagaagaccttgtcgaacatttatcagcaaaagccgcgcctcatacaa
gtcagtggggggacagacttcgtcatccacgggctaacgctgcaaaacgcgccggacttc
aacattgtcactgacggtgtgacaggagtgactgtctgggggatcaagattttgactccc
agccgggtctacacggttgagggctaccgctgcccgaccggctcgacgcctgaccagaag
accccgggcacctgctttaccccggaaaccgtgaagaacaccgatggcttcgaccccggc
caatcaaacaaggtgctgctggcctactcctatatcagtacgggtgatgacaacgtagcg
ataaagtccagccgcacctccggcagccgggacctgatgttcgcgcacaatcacttctac
tatgggcacggcttgtccatcggcagtgaaaccaacggcggcgtacacaatgtcagcgtt
gtggatttggcagcagatggcgcagacagccaggacggcattggactgagaataaagtca
ggagccaagagcggaggaaccgtcgacagcgtcagctacgcgaacatatgcatgcgcaac
gtcaaattcccgctggtgttcgacaccaactacggcagcgtcggcggaacctcgtaccct
gatttcagtggtatcaccgtgaaaggcttccactacctgggcagccaacgcttcggtggc
ggtaagacgacttttgtcggatacaatgacaacggccaaaaacgaccgatttccatcacg
ctggataacgttgtctttgacggaacccaacccagcttcaccggactcacctcgacccac
ttcatattggggccagggccggtcagttttgccaacaaactggtgccttcgataaaggat
gacgtcacggtgtccggaagtcctggtaacggaacaccggtcgattgcacggcagcgttc
gtaccgatgaaatccgtggtgcctgaggctccgttctag
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