KEGG   Pseudomonas avellanae: BKM03_31345
Entry
BKM03_31345       CDS       T05369                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pavl  Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:pavl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pavl03032]
    BKM03_31345
   03036 Chromosome and associated proteins [BR:pavl03036]
    BKM03_31345
   03400 DNA repair and recombination proteins [BR:pavl03400]
    BKM03_31345
DNA replication proteins [BR:pavl03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BKM03_31345
Chromosome and associated proteins [BR:pavl03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BKM03_31345
DNA repair and recombination proteins [BR:pavl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BKM03_31345
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 SSPI
Other DBs
NCBI-ProteinID: AVB23514
UniProt: A0AAD0GUH3
LinkDB
Position
p3_tig6:complement(30388..30681)
AA seq 97 aa
MALTKDQLVAGIAEAIDAPKNTARKVLEQLGQIVADQLESGAEITLPGIGKLKVAERPAR
TGRNPSTGATIEIAAKKVVKFVSAKVLNDAINKGGVS
NT seq 294 nt   +upstreamnt  +downstreamnt
atggctctgacgaaagaccaattggttgccggtattgcagaagctatcgatgcgccaaaa
aacaccgcgcgtaaggttcttgagcaattgggacagatcgttgccgaccaactggaaagc
ggtgcagaaatcactctaccgggcatcggcaaattgaaagttgcagagcgtccagcacgc
actggccgcaacccttcgactggtgccaccatcgaaatcgctgccaagaaagtcgtcaag
ttcgtctcggctaaagtgctgaacgacgcgatcaacaagggcggcgtctcatag

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