Pseudomonas avellanae: BKM03_31345
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Entry
BKM03_31345 CDS
T05369
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavl03032
]
BKM03_31345
03036 Chromosome and associated proteins [BR:
pavl03036
]
BKM03_31345
03400 DNA repair and recombination proteins [BR:
pavl03400
]
BKM03_31345
DNA replication proteins [BR:
pavl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BKM03_31345
Chromosome and associated proteins [BR:
pavl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BKM03_31345
DNA repair and recombination proteins [BR:
pavl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BKM03_31345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
Motif
Other DBs
NCBI-ProteinID:
AVB23514
UniProt:
A0AAD0GUH3
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All DBs
Position
p3_tig6:complement(30388..30681)
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AA seq
97 aa
AA seq
DB search
MALTKDQLVAGIAEAIDAPKNTARKVLEQLGQIVADQLESGAEITLPGIGKLKVAERPAR
TGRNPSTGATIEIAAKKVVKFVSAKVLNDAINKGGVS
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggctctgacgaaagaccaattggttgccggtattgcagaagctatcgatgcgccaaaa
aacaccgcgcgtaaggttcttgagcaattgggacagatcgttgccgaccaactggaaagc
ggtgcagaaatcactctaccgggcatcggcaaattgaaagttgcagagcgtccagcacgc
actggccgcaacccttcgactggtgccaccatcgaaatcgctgccaagaaagtcgtcaag
ttcgtctcggctaaagtgctgaacgacgcgatcaacaagggcggcgtctcatag
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