'Prunus avium' virescence phytoplasma: JNO41_00140
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Entry
JNO41_00140 CDS
T11567
Name
(GenBank) DNA double-strand break repair protein Rad50
Organism
pavv 'Prunus avium' virescence phytoplasma
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Motif
Pfam:
ABC_tran_CTD
TolA_bind_tri
CCDC39
7TM_GPCR_Srh
KwaA
ATG16
Sec10_N
Motif
Other DBs
NCBI-ProteinID:
XVJ84907
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Position
25417..27057
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AA seq
546 aa
AA seq
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MLTPLNLIKGFINFRAYYTWAITAISIFSIFFFFKRKYDNTHNNYSTTWKGYLVYFLIIL
FLFSFIYLSFFKTLPSSKYVGQLIGEIDKAIDKYDETINNYKGLKKDWETELKKCEDELK
TLYEKQEITQEQKEKIKKILEQNEGKIKEIKDQLKDTTDNIAILKGQLLQLEQDKETKEK
EIKQKQEEEKLASPDDKIRLQAQISKLQSEKSKIIGEIEKIEFQIGKLENKQSSLTEQLE
LAETFKKGLKEKLNNLSEKFKELSTIITTWEDRKAEIQTNINEVNQKLEEIGTERDLYGI
LKNKYQDMHNRLITYEKENALTFGTATKAAFKAFDKITDLFPAKFAIKTLGKTISVNRKF
AQGAVKSAVVLHEGHRLWHMYNDVINENKEHPLMITKETLEMYTKDIDRDLARLNADYKD
CEKKKEEYNKINNEASCKEQIKNWQHQNDKQSSVIEQEWKDWIKEYVKINEELVDKLKEV
SGTRGLYNDKDNLEQQLEDKNVEIETAKAVLKEKNPSYARAQARFEEKQKAKRQTKIPEL
VIIPNK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaccactaaatttaattaaaggttttattaactttagagcctattatacttgg
gccattacggccatctctatttttagtattttctttttcttcaaaagaaaatacgacaac
acacataacaactacagcactacttggaaaggctatttagtttattttttaattatttta
tttctttttagttttatttatttatcttttttcaaaacactaccatcatctaaatatgtc
ggccaattaattggggaaattgataaagccattgacaaatacgatgaaactattaataac
tataaaggccttaaaaaagactgggaaaccgaattaaaaaaatgtgaagatgaattaaaa
acattatatgaaaaacaagaaattactcaagaacaaaaagaaaaaattaaaaaaatttta
gagcaaaacgaaggaaaaattaaagaaataaaagaccaattaaaagatactacagacaat
atcgctattttaaaaggacaacttttacaattagaacaagataaagaaactaaagaaaaa
gaaattaaacaaaaacaagaagaagaaaaattagcatcccctgatgataaaattagatta
caagcacaaatctctaaattacaatccgaaaaatcaaaaataattggcgaaatcgaaaaa
attgaatttcaaatcggcaaattagaaaacaaacaaagttctctaacagaacaactagaa
ctcgccgaaacctttaaaaaaggattaaaagaaaaattaaataatttatcagaaaaattt
aaagaactatcaacaatcataacaacttgggaagatcgcaaagctgaaattcaaactaac
atcaacgaagttaaccaaaaattagaagaaataggaactgaacgagatttatatggaatt
ctaaaaaacaaataccaagacatgcacaatcgcttgattacctatgaaaaagaaaacgca
ttaacttttggaactgcaacgaaagccgcttttaaagcttttgataaaattactgattta
ttccctgctaaattcgctattaaaacattaggaaaaactattagtgttaatcgaaaattc
gctcaaggagctgttaaatctgctgtagttcttcatgaaggacatcgattatggcatatg
tataacgacgtaattaatgaaaacaaagaacatccattaatgattaccaaagaaacttta
gaaatgtatactaaagatatcgaccgcgatttagccagacttaatgccgactacaaagac
tgtgaaaagaaaaaagaagaatataataaaataaacaacgaagcttcttgtaaagaacaa
ataaaaaactggcaacaccaaaacgacaaacaaagtagcgtcatcgaacaagaatggaag
gactggatcaaagaatacgtcaaaatcaacgaggaattagtagataaactaaaagaagtt
tcaggtacgcgtgggttatacaatgataaagataatttagaacaacaactagaagacaaa
aacgtagaaatcgaaactgcaaaagccgtacttaaagaaaaaaatcctagttatgctcgc
gcccaagcacgttttgaagagaaacaaaaagctaaacgtcaaacaaaaatccctgaatta
gttattatccctaataaataa
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