Cutibacterium acnes 266: PAZ_c13050
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Entry
PAZ_c13050 CDS
T01971
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
paw
Cutibacterium acnes 266
Pathway
paw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAZ_c13050 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paw03021
]
PAZ_c13050 (rho)
03019 Messenger RNA biogenesis [BR:
paw03019
]
PAZ_c13050 (rho)
Transcription machinery [BR:
paw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PAZ_c13050 (rho)
Messenger RNA biogenesis [BR:
paw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PAZ_c13050 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
AAA_22
AAA_25
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEE72474
LinkDB
All DBs
Position
complement(1333464..1335365)
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AA seq
633 aa
AA seq
DB search
MTQTSQPDGSLDLSTKLLPELRSIATQMGIKGARGMRKADLIAAISEGGYPGVGRPAERQ
NRGQESGTSSDEGRQQRTQRRRRAEASEDSEFNKSAGGKKTPSVGDLLDAAEAQKQAETA
KKPDDQDPGQQDGGADRPGRERGDRSRRGDSPRRRARNTSRENFNSNSGDSNINDEVGAR
LEALSRGQRGERNQSDRGPQHDHNNDSSVDSDDEYGRFSEYGNGGRRSRRRRQRDRQNRR
KRSNDRYSDSEPNVREDDVLVPCSGILDIRDQYAFVRTSGYLPGANDAYVSMAIVRRHRL
RKGDVIVGQMRAHREGERREKFAPLVKIEQVNGVDPEQMKQRPEFSKLTPLYPQERLRLE
DDPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTMIMQSIANSITRNNPEVHLMVVLVDE
RPEEVTDFQRTVSGEVVASTFDRPADDHTQLSELAIERAKRLVELGHDVVILLDGITRLG
RAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEHGGSLTILATALVETGSKMDEVI
FEEFKGTGNMELRLRREFANKRLFPAIDVDASGTRREELLLSREETAIMWKLRRVLSGLE
GSQALEMMLSRLRKTQTNVEFLYTISKTTPNQD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaaacctcacagccggatggatccttggatctgtccactaagttgctccccgag
cttcgttctatcgctactcagatgggaattaagggagctcgtggtatgcgcaaggctgac
ctcatcgcggctatctctgaagggggatatccgggagtcgggaggccagctgagcgtcag
aatcgcggtcaggaatccggtacttctagtgatgagggccggcaacagcgcacccagcga
cgccgtcgcgcggaggcttctgaggactccgaattcaataaatctgcaggggggaagaaa
actccgtcggtaggcgacctactcgacgccgccgaggctcagaaacaagcggaaacagcc
aagaaacctgacgaccaagatccgggtcagcaggatggcggagctgatcgcccgggccgt
gagcgcggtgaccgcagtcgtcgaggcgattcacctcgacgacgagcccgcaatacctca
cgagaaaatttcaacagcaattctggcgacagcaacatcaacgacgaggttggtgcccgg
cttgaagcgctgtctcgcggtcaacgcggtgaacgcaaccagtccgatcgtggccctcaa
catgatcacaacaacgactcttctgtcgattccgacgacgagtacggtcggttctcggaa
tacggcaatggcgggcgacgttctcgccgccgtcgccagcgtgaccgtcaaaaccgtcgc
aagcgttctaacgaccgctactccgattcagaaccgaatgtgcgtgaggacgacgtcctt
gtcccgtgctcgggcatcctcgacattcgtgaccagtatgcctttgtgcgcacttcggga
tatcttcctggcgccaatgatgcctatgtctcgatggctatagtgcgtcggcaccgcctg
cgcaaaggcgacgtcatcgtcggtcagatgcgtgctcatcgcgaaggggagaggcgtgaa
aagttcgcgccgctggtcaaaatcgagcaggttaatggtgttgatcccgagcagatgaag
cagcgtccggagttttctaagctcactccgctgtatccgcaggaacgtctgcgtctcgag
gacgaccccaaaaacatgactgggcggatcatcgatctcgtcagtccgattggtaaaggc
cagcgcggtctcatcgtttcgcctccaaaggctggcaagacgatgatcatgcaatcgatc
gcaaactcgatcactcgcaataaccccgaagttcacctcatggtggtgttggtcgacgag
cgccccgaggaggtcactgacttccagcgcactgtcagcggcgaggtcgtcgcatcgacc
ttcgaccgccctgctgacgaccatactcagctgtccgagctggccatcgagcgtgccaaa
cgtctcgtagagcttggtcacgacgtcgtcatcttgctggacggcatcactcgtctggga
cgtgcgtacaacttggccgcccctgcttccggtcggatcctttccggtggtgtcgactca
gctgccctgtacccgccgaagaagttctttggcgctgctcgtaatatcgaacacggtggg
tccctgacgatcctcgccaccgctctggttgagaccgggtcgaagatggacgaggtgatc
ttcgaggagttcaaaggcactggcaatatggagttgcggctccgtcgcgaatttgccaat
aagaggctgttccctgctatcgacgttgacgcatccggtacccgtcgcgaggaattgctg
ctgtcgcgcgaggagacagcgattatgtggaagctgcgcagagtgctgtctggtctggaa
ggctcccaggctctcgaaatgatgctttcgcggctgcgtaagacccagacgaacgtggag
ttcttgtacaccatttcgaagacgaccccgaaccaggattga
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