Cutibacterium acnes 266: PAZ_c13750
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Entry
PAZ_c13750 CDS
T01971
Symbol
uvrD1
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paw
Cutibacterium acnes 266
Pathway
paw03420
Nucleotide excision repair
paw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAZ_c13750 (uvrD1)
03430 Mismatch repair
PAZ_c13750 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paw03400
]
PAZ_c13750 (uvrD1)
Enzymes [BR:
paw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAZ_c13750 (uvrD1)
DNA repair and recombination proteins [BR:
paw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAZ_c13750 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
PAZ_c13750 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
AAA_12
DUF3263
Motif
Other DBs
NCBI-ProteinID:
AEE72542
LinkDB
All DBs
Position
complement(1396622..1398742)
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AA seq
706 aa
AA seq
DB search
MLLSVTTLMVIAVRTRTADAILAALDPEQVKVAKTFDVPVCVIAGAGTGKTRAVTHRIAY
GAVTGKLDPRRTLAVTFTTKAAGTMRGRLADLGVVGVQARTIHSAALRQIKFFWPRAYNC
ELPPVSDSRFSMVAETTHRIGLGNDKALLRDLSAEISWAKVSNVPTDQYASLARAEGRVV
AGVSATDVGRVLAGYEAVKRERCVIDLDDILLCAVGLLVQHRDITEEIRARYRHFVVDEY
QDVSPLQHRLLELWFGDRNDVCVVGDPHQAIHSYAGARADYLLDFVADHPGAKRIDLVRN
YRSTPEIVQLANEVLVNRMTPEEALEHGRGVTLVSRGRSGPEPIYQALGDDASEASAVAM
WIESRHAAGIPWSEIAVLYRINSQAAQLETALAERSIPYLVKGSERFYDRGEVRRSLDAL
ARLAADEPGADPLRAFDRILAAQGWSAIAPDGEGDVRQRWESLQALHDLTVSVVDDGTRT
LEELAAVFSRRAATQEAPVGDGVTLATLHASKGLEWDVVALYGINDTMVPFIMAEAPAEV
ASERRLLHVGVTRARRDLWVSYSWSGGNRDRQGISRFLRGLPGTGETTDKPPRHRRKRRA
TITVCSVCGKALTAARDRKLGHHLACEVGVDPVLVERLRQWRSERAEADRVPAFVILTDA
TLLGVAEKRPNSMESLLQVPGIGRRKADLYAADLIKVLHGSSDNQQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtcggtcacgacccttatggtgatcgctgtgagaacccgaacggcagatgcg
attctggcggcactggatcctgaacaggttaaggttgcgaagaccttcgatgttccagtg
tgcgtcatagctggtgccgggacaggtaaaactcgtgctgtcactcatcgcattgcctac
ggcgcagtgacaggcaagcttgatccgcgtcgtaccctcgcggtcacttttacgactaag
gcagctggcacgatgagaggtcgactcgccgatctgggggttgttggtgtgcaggctcgc
actattcattctgcggcgttgcggcagatcaagtttttctggcctcgtgcatataactgt
gagttgccaccggtgagtgattctcgtttctcgatggtggcggagacgacccatcgcatt
ggtctgggcaatgacaaggcgctgctgcgcgacttgtccgccgagatctcgtgggcgaag
gtctcaaatgtgccgactgatcaatacgcatccctggctagggcggaaggccgggtggtg
gcgggagtttcggcaactgacgtaggacgcgtcctcgctggatatgaggctgtgaagagg
gaacgctgcgtcattgatctggacgatattttgttgtgcgcggtgggattgttggttcag
caccgtgacatcactgaggagattcgggctcggtaccgacatttcgttgtcgacgaatac
caggacgtttctccgctgcagcataggttgcttgaactgtggtttggcgatcgaaatgat
gtatgcgtcgtgggagatccgcaccaggccattcactcttatgcaggcgcacgagctgac
tacctcctcgacttcgttgccgatcatcctggcgctaaacgcatcgatttggttcgcaac
taccgctccactcccgagatcgttcagttggccaatgaagttcttgtcaaccgtatgact
ccagaggaggctttggaacatggcaggggagtcacattggtttcgcggggtcgatccggt
cccgagcccatctatcaagctctcggggacgatgcctccgaagcttcagctgtagcaatg
tggattgaatcgcgccatgctgcgggaatcccatggtctgagattgccgtcttgtaccgg
attaattctcaggcagcccagcttgagaccgcgctggccgagaggtccatcccatatctt
gtgaaggggtctgagcgcttctatgacaggggcgaggtgcgacgcagccttgacgctttg
gctcggcttgctgctgatgaaccaggtgcggatccgctacgggcttttgatcggatactc
gcagctcaaggttggtcggctattgcgcccgacggagaaggtgatgtccggcaacggtgg
gaatcgttgcaagctttgcacgacctgacggtctcggttgtagacgacgggacgaggacg
ctggaagaactggcagccgtgttctcccgtcgggcggccactcaggaggcgccggtcggc
gacggcgttaccttggcaaccttgcatgcatctaaggggctcgaatgggatgtcgtggcc
ctctatggcataaatgacacgatggtgcccttcatcatggctgaagctccggctgaggtg
gcttcggaacgccggttgttgcatgttggcgtaactcgagcacgacgagacctgtgggtc
tcgtactcgtggtctggagggaaccgggaccggcaggggatctcgcgatttttgcgcggc
ctccctgggacgggggaaacgaccgacaaacccccgcgacatcgccggaaacgtcgtgcc
acgatcacagtctgctcggtgtgcggcaaagcccttacggcggccagagaccgaaaactc
ggccatcaccttgcctgcgaggtgggggtcgacccagttctcgtcgagaggttgcggcag
tggcgcagcgaacgcgcggaagccgatcgagtgccagctttcgtcattctcacggacgct
accttgctgggcgtggcggagaaacgacctaactctatggaaagtttattgcaggtcccc
ggaattggtaggcgcaaggccgatctttacgcggctgatctcatcaaggtgctgcacggt
tcctcggataaccaacagtga
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