Cutibacterium acnes 266: PAZ_c15540
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Entry
PAZ_c15540 CDS
T01971
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
paw
Cutibacterium acnes 266
Pathway
paw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAZ_c15540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paw03019
]
PAZ_c15540
Messenger RNA biogenesis [BR:
paw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PAZ_c15540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEE72712
LinkDB
All DBs
Position
complement(1568485..1570158)
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AA seq
557 aa
AA seq
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MTPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEMLVIDCGVLFPEDDHPGVDLLLPGLD
YLDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGY
KLNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRI
TDLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHV
HRVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVI
ISTGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAV
VHKGNALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL
VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT
RSASVVSRPAIQARGFAEGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTIGRWV
SRSLRRRPMIVPVVVKI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacacctccggacctgcaaccggacgttttgcgcatcatccccctcggaggcttgggg
gatgttgggcgcaacatgtcgtgctatgaaatcaacggggagatgctcgtcattgactgc
ggggtgctcttcccagaggacgaccatcccggggttgatttactgcttcccgggctggac
tacctcgacgaggagaagctggccaaggtgaaggctctggtgctcacacatggccacgag
gatcatattggtgcggtgccgtacctgcttaaacgtcgccccgatatcccgatctacggc
tctaagctgaccctggcgctggtcgaggcgaaactgcgtgaacaccgcattaagggctac
aaactcaatgttgttcacgagggcgatgtcgctgaggttggcgagcagtttgacctggaa
tttatcgccgttaaccactccattcctgacgctctggcagtgtgtgtgcgcaccgatgcc
ggaactctcattaacaccggcgacttcaagatggaccagcttccgctagacggacgcatc
accgatctgcgtgccttcgcgcgactcggtgaggagggggtcgatctgttcatggttgac
tccacgaatgccgaggttccggggttcgtgaagtccgagactgagatcgagcctgctatc
gagagggtcttcgagaaggcgaaaaagaagcttattgtggcttgcttcgcctcccatgtg
catcgcgtccagcaagtgctcaatatggccgtgcgtcatcaccgcaaggtttgctacgtc
ggtcgttcaatggtccgcaatatggctgttgctcaggacctgggctacctcgacgtgccg
gagaacaccgtcatcgagctgcgcgacctcgaccactaccgagataacgaggtcgtcatc
atctccactgggtcccaaggtgagccactttcggccctagcaaggatcgccaaccgagag
caccgagacatcgaggtgggggagggagataccgttttgctggcatcctctctcatcccg
ggtaatgagaatgccgtctatcgagtgattaatggcctgacgaagcttggcgccgccgtg
gtacataagggcaacgctttggtccacgtttccggccatgccgcagccggagagctgctg
tacgcgtataacatcgtgcggccacgcgctgtgatgccgattcatggtgaggtgcgtcat
cttgtcgctaatgccgatctggccaaagcaaccggtgtcgatgagaacaacgtggtgctt
gtcgaggacggcggggttattgaccttgttgacggagtaccgcgagttgttggcaaggtc
gatgcctcgtacatccttgttgacggatctggggtgggggagcttaccgaggacacgctc
actgatcgccgtatcctcggtgaggagggattcttgtcagtcgtcaccgtggtcgacacc
cgctcggcgtcagtggtgtctcgcccggcgatccaggcgcgtggttttgccgagggcgac
tcggtcttcgcggagatcaccgaccagatcgtcaccgagctagagaaggcgatggccggt
ggtatggacgatacccaccggttgcaacaggtggttcgtcggaccattggtcggtgggta
tcgcggtctctgcggcgtcgacctatgatcgtgcctgtcgtcgtcaaaatctga
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