Cutibacterium acnes TypeIA2 P.acn31: TIA2EST36_07935
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Entry
TIA2EST36_07935 CDS
T01655
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pax
Cutibacterium acnes TypeIA2 P.acn31
Pathway
pax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TIA2EST36_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pax03400
]
TIA2EST36_07935
Enzymes [BR:
pax01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TIA2EST36_07935
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TIA2EST36_07935
DNA repair and recombination proteins [BR:
pax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TIA2EST36_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
AEW84163
LinkDB
All DBs
Position
complement(1713204..1714022)
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AA seq
272 aa
AA seq
DB search
MPEGHVIHRLANAIDLAFAGSRVEVTSPQGRFAESAAMLDGTVLASAQAWGKHLVVDFDN
HRPDHLLHIHLGLIGKLAVEPTVPVVGQVRLRITDGVTAADLRGPQTCELINDDEWGTVA
ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATP
GKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAMGRPPRVDHHGGEVYVYRRE
DQPCLVCNTPVRMVAQGGRHLFWCSRCQRRRH
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaaggccacgtcatccatcgtcttgccaatgccatcgacttggccttcgccggt
tcacgggttgaggtcacttctccgcagggacgattcgccgaatccgcagccatgctggat
gggacagtgctggcctcagctcaggcatggggcaaacatctcgtcgtggacttcgataat
catcgtcctgaccacctgttacacatccacttgggattgattggcaagctggcagtcgag
ccgacagttcctgtggtcggtcaggtgcggttacgcatcaccgacggcgttactgcagct
gatctacgcggtccgcaaacgtgcgagctcatcaacgacgacgagtgggggacggtcgca
gccactattggccccgaccccatccgcgacgatgcagatccggacgttgcatgggacaag
gtacgacggtcgtcacggcgaatcagcgatgtgttgttagaccaaagggttgcggccgga
gttggcaatatttaccgagctgaggtgttatttcgccaccgcgttgatccagccacccct
ggcaagcagatttcccactcaacgtggttggcgatgtgggatgatctggtcatgctcatg
cgcgccggagttgagtcagggcgcatcgacaccgtgcagccagagcacactccggaggcg
atgggtcggccccctcgggtagatcatcatggcggtgaggtgtacgtctaccggcgcgag
gaccagccctgtttggtgtgtaatacgccggtgcggatggtcgcacagggagggcgtcac
ctgttttggtgctcacggtgtcagcgtcggcgtcactga
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