Photorhabdus asymbiotica: PAU_00004
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Entry
PAU_00004 CDS
T00941
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pay
Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pay03032
]
PAU_00004 (gyrB)
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_00004 (gyrB)
Enzymes [BR:
pay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PAU_00004 (gyrB)
DNA replication proteins [BR:
pay03032
]
Prokaryotic type
DNA Topoisomerases
PAU_00004 (gyrB)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PAU_00004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
TcaA_2nd
DUF6865
DUF2526
Motif
Other DBs
NCBI-ProteinID:
CAQ82097
UniProt:
C7BTW2
LinkDB
All DBs
Position
3687..6104
Genome browser
AA seq
805 aa
AA seq
DB search
MMSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCNEV
IVTIHADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEKLELVIRRDGKVHEQTYHLGVPQSPLKIVGETEQTGTRVRFWPSMDTFRNN
TEFQHDILAKRLRELSFLNSGVSIRLIDKRTNTEDHFHYEGGIKAFVEFLNKNKTPIHPN
VFYFSTEKDGIGVEISMQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDK
EGYNKKSKVSATGDDAREGLVAVISVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVE
YLLENPNDAKTVVSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSE
LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKK
GKQEQYIKDDEAMDEYQLSIALDGASLYTSDHTPALRGEPLEKLVTEFNGVKKIIKRMER
LYPASLLNNLIYHPKLTEEALTDETKVQEWIETLVTRLNDREQNGSSYSYQLHENRERQM
FEPILRVRTHGVDTDYPLDFDFVHGGEYHRITLLGDKLSNLIEENAYIERGERRQPVSDF
EQALEWLTKESRRGLSIQRYKGLGEMNPEQLWETTMNPETRRMMRVTVKDAIATDQLFTT
LMGDAVEPRRAFIEENALKAANIDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtcgaatacatatgactcctcaagtatcaaggtattaaaagggctggatgcggtt
cgtaaacgtccgggcatgtatatcggcgatacagacgatggtaccggcttacaccacatg
gtcttcgaggttgtcgacaacgctatcgacgaagccctcgcaggccactgtaatgaagtt
atcgttactatccacgccgataactctgtctctgtacaggatgatggccgcggtattcct
accggcatacacgaagaagaaggtgtttcagcagccgaagttattatgaccgtgctgcat
gcggggggtaaattcgatgataactcttataaagtttccggcggcctgcacggtgtaggg
gtttctgttgttaacgccttgtctgaaaagctggaactggttatccgccgtgatggtaaa
gttcatgaacagacttatcaccttggtgtgccacaaagcccactgaaaatcgttggagaa
actgaacagacaggtactcgtgttcgcttctggccaagcatggatacttttcgcaacaac
actgaatttcagcatgacattctggccaaacgcctacgtgaactttccttcctgaattcc
ggtgtatccattcgccttattgataagcgcacgaatactgaagatcacttccattatgaa
ggtggaattaaagcgtttgttgagttcctaaataaaaacaaaacgccaatccatccaaat
gttttctatttctcgacagaaaaagatggcatcggtgttgaaatttcaatgcaatggaac
gatggcttccaggaaaatatttactgctttaccaataacattccacagcgcgatggcggt
actcacttagttggcttccgtaccgcaatgactcgtacccttaatagctacatggataaa
gaggggtacaacaagaaatctaaagtcagcgctaccggtgatgatgctcgtgaaggttta
gttgcagttatttccgttaaagtacctgatccaaaattctcttctcagactaaagacaaa
ctggtttcttccgaagtgaaaactgctgttgaaacactgatgaatgagaagctggtggaa
tacctgctggaaaatccaaatgatgccaaaacagtcgtcagtaaaatcattgatgctgcc
cgagcccgtgaagccgcccgtaaagcacgcgaaatgacacgtcgcaaaggagctcttgat
ttggctggtttaccaggcaaattggctgattgtcaggaacgtgacccggcattgtccgaa
ctctacttagtggaaggggactcggcaggcggttctgcaaaacaggggcgtaaccgcaaa
aatcaggcaatcttgccattgaaaggtaaaatcctaaacgtcgaaaaagcgcgtttcgat
aaaatgctgtcttctcaggaagttgcaacactgattactgcattgggctgtgggataggc
cgtgacgaatacaacccggataagctgcgttatcacagtattattatcatgacggatgcg
gatgtcgacggttctcatattcgtactctattgctgaccttcttctatcgtcaaatgcca
gaaatcattgaacgtggtcatgtgtttattgctcagccaccgctgtataaagtgaaaaaa
ggcaaacaggagcagtacattaaagatgacgaagctatggacgagtaccaactctctatt
gctttggatggtgcatccctttacaccagcgatcacacaccagccttgagaggggaacct
ctggaaaaactggtgacagaatttaatggtgtgaagaaaatcatcaaacgtatggagcgt
ctctatccagcaagtttgctaaataacctcatttatcatccaaagctgactgaagaagcg
ctaaccgacgaaacaaaagtccaggaatggattgaaacgctggtaactcgcctgaatgac
cgagaacaaaacggcagcagctacagctatcaactccatgaaaatcgtgagcgccaaatg
tttgaacccattctgcgtgttcgtacacatggtgtcgataccgattacccactggatttc
gactttgtccacggcggtgaataccaccgtattactttgttaggcgataaacttagtaat
ttaatcgaagagaacgcttacattgagcgtggtgaacgtcgccagcctgtcagtgatttt
gagcaagctctagaatggttaacgaaagaatcacgtcgtggtctgtctatacagcgttat
aaaggtctgggagaaatgaaccctgagcagttatgggaaacgaccatgaacccggaaacc
cgccgaatgatgcgcgtgacagtaaaagatgccattgccactgatcaattatttacaact
ctaatgggtgatgccgttgaaccccgtcgggcatttattgaagaaaatgcgctgaaagca
gcaaatattgatatctaa
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