Photorhabdus asymbiotica: PAU_00299
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Entry
PAU_00299 CDS
T00941
Symbol
polA
Name
(GenBank) dna polymerase I polA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03030
DNA replication
pay03410
Base excision repair
pay03420
Nucleotide excision repair
pay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAU_00299 (polA)
03410 Base excision repair
PAU_00299 (polA)
03420 Nucleotide excision repair
PAU_00299 (polA)
03440 Homologous recombination
PAU_00299 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pay03032
]
PAU_00299 (polA)
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_00299 (polA)
Enzymes [BR:
pay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAU_00299 (polA)
DNA replication proteins [BR:
pay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PAU_00299 (polA)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PAU_00299 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAU_00299 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
WHD_GTF3C1_N
Motif
Other DBs
NCBI-ProteinID:
CAQ82392
UniProt:
B6VM99
LinkDB
All DBs
Position
331752..334541
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIADNPLILVDGSSYLYRAYHAFPPLTNSTGEPTGAMYGVLNMLRSLVMQYKPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQLVEAMGLPLLVVPGVEADDVIGT
LALQAEKEGRSVLISTGDKDMAQLVTPNITLINTMNNTILGPEEVVEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTALGLLQGIGGIDDIFANLDKIAGLSFRGAKTLANKLEPHK
DVAYLSYKLATIKTDVELDKTCVALSVAKPDTEKLHQLFSRYEFKRWLSDVANGDWLAAK
DKKLASTGSDDSASVESESVSSTLPSDNYQTILDQKSFDEWIEKLKRAPVFAFDTETDSL
DTLTANLVGMSFAITAGDAAYLPLGHDYLGAPEQLDRDAVLAALKPLLEDSNLLKIGQNI
KFDCGVLVRYGIELQGIAYDTMLESYVLNSVAGMGRHDMDSLAERHLNYKTTTFEEIAGK
GKNQLTFNQVPVEQAAMYAAEDADVTLQLHQVIWPQLEKVPALEKVFLETEMPLIMVLSR
MERAGVLINSDILAEHSKEIAVRLDELEKEAHELAGEVFNLASPKQLQTILFEKLNLPVV
KKTPGGAPSTNEEVLEELVDHHELPKVILEHRGLAKLKSTYTDKLPQMVHPLTKRVHTSY
HQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIASEGYRIMAADYSQIELRIMAHLSQ
DQGLLKAFAEGQDIHRATAAEVFDVPLEQVTSEQRRSAKAINFGLIYGMSAFGLSRQLGI
PRGEAQRYMDLYFERYPGVLAYMERTREQAEEQGYVETLAGRRLYLPDIKSRNGTRRKAA
EREAINAPMQGTAADIIKKAMIAVDDWIISEAPKVRMIMQVHDELVFEVHESELENTEQK
IRELMEKSVVLDVPLQVDVGIGDNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatagcagacaatcccctgattttggttgatggttcctcatacctttatcgc
gcgtatcatgctttccctccactaaccaatagtacaggcgaacctaccggagctatgtat
ggcgtattgaatatgctacgtagtctggtcatgcaatataaaccgagccatgtagcggtg
gtattcgacgccaaaggtaaaactttccgtgatgaattgtttgctgaatataagtctcat
cgtcctcctatgccagatgatctgcgtgcgcagatagaaccattacatcagctggtcgaa
gctatggggctaccattgctggtggttccgggggtagaagctgatgacgttattgggact
ttggcgttacaggcggaaaaagaggggcgttcggtacttatcagcactggtgataaggat
atggcgcaattggtaacgccgaatatcacactgatcaataccatgaataacactattctg
ggaccagaagaagtcgttgaaaaatatggtgttccgccagagttgattatcgattttctg
gcgctgatgggggattcttcagacaatattcctggcgtacctggtgtaggggagaaaact
gcactagggttattgcaagggattggtggtatagatgatatctttgccaatttggataaa
attgcggggctaagtttccggggagcaaaaacgctggcgaataagctagaaccgcataaa
gatgtggcttatctctcttataaattggcaactatcaaaactgacgttgagttggataaa
acctgtgttgcgctatcagttgcaaaaccggatacagagaaactacatcagttgttctca
cgttatgaatttaaacgttggttgagtgacgtggcaaatggcgattggttggctgctaag
gataaaaagctggcatcgaccggcagtgatgactcagcctcggttgaaagtgaatctgtt
tcgtcaacgctaccttctgataactaccaaacgattcttgatcagaaaagctttgacgag
tggattgagaaacttaaaagagcgccagtttttgcttttgataccgaaactgacagcctt
gatactttgacagctaatctggtgggtatgtcgtttgcgataaccgccggagacgcggct
tatttgcctctgggacatgactatctgggtgcgccagagcagcttgatagagatgctgta
ctggcagcattaaagcctctgcttgaagatagcaacctgttgaaaatcggacaaaatatt
aagtttgattgcggtgttctggttcgctatggcattgaactgcaaggtatcgcttacgat
actatgctggaatcttatgtgctcaacagcgttgcaggtatggggcggcatgatatggat
agtctggctgaacgtcatctgaattataagaccacgacgtttgaagaaattgccggtaaa
ggtaaaaatcagctgacttttaatcaggttccggtggaacaggctgcaatgtatgccgca
gaagatgcagatgtcactttgcagctgcatcaggttatttggccgcaattggagaaagtt
ccagcattggaaaaagtgttcctggaaacagaaatgccattgataatggtactttcccgt
atggaacgtgcaggcgtactgattaattcagatattttggctgagcattcaaaagagatc
gctgttcgtttggatgagttagaaaaagaagcacatgaattggcaggtgaggttttcaat
ctggcttcgccaaaacagttacagacaatattatttgaaaagttgaatctgccagtcgtg
aagaagacgccaggtggtgcaccatctactaatgaagaagtgctggaagagttggtggat
caccatgagttaccgaaagtaattttagagcatcgtgggttggcaaaactgaaatccact
tacacagataaattaccacagatggtccatccgctgaccaaacgggttcatacttcctat
catcaggcagtaacagcaacagggcgtctctcttcacgtgatcctaatttgcaaaatatt
cctgtccgtaatgaagagggccgccgcattcgtcaggcatttatagcttctgaaggttat
cggattatggccgctgactattctcagattgagttgcggattatggctcatttatctcag
gatcaagggttgttgaaggcttttgctgaagggcaagatattcatcgggcaacggcggca
gaagtctttgatgtaccgttggaacaggtaactagtgaacagcgtcgtagtgctaaagca
attaactttggtttgatctacggtatgagtgcgtttggtctttcccgtcagttaggtatt
ccgcgtggagaagctcagcgctatatggatctttattttgagcgttatcctggcgtattg
gcgtatatggagcgtacccgtgaacaggcggaagaacagggttatgttgaaacgctagct
ggtcgtcgtctttatttgccagatatcaaatctcgcaatggtacgcgtcgtaaggcagca
gagcgtgaagctattaacgcgccaatgcagggaactgcggcggatatcatcaaaaaagca
atgattgcggtggatgactggattatcagtgaagcgccgaaagttcgtatgattatgcag
gttcatgatgagctggtatttgaggttcatgaatcagaacttgaaaatacagaacagaaa
attcgtgaattgatggagaagagcgtggttcttgatgttcctttgcaagtagatgtgggt
atcggtgacaactgggatcaggcacactaa
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integrated database retrieval system
