Photorhabdus asymbiotica: PAU_00579
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Entry
PAU_00579 CDS
T00941
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAU_00579 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pay03019
]
PAU_00579 (rppH)
Messenger RNA biogenesis [BR:
pay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PAU_00579 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
CAQ82671
UniProt:
C7BKI5
LinkDB
All DBs
Position
655638..656168
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELYEEVGL
GRKDVRILASTRNWLRYKLPKRLVRWDTRPVCIGQKQRWFLLQLLCNEEDINVQHSNTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASAVMPIQENLLLPRPSYSYRRKRS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtaggaattgtaatttgtaatcggcaaggc
caagttttgtgggcccggcgctatgggcagcattcttggcaatttcctcagggaggcatt
aatccgggggaatcaccagaacaggctatgtaccgggaactgtatgaagaagttggttta
ggtcggaaagatgtacgtattctggcttccactcgtaattggttacgttacaaattaccc
aagcgtttggtgcgttgggatacaagacctgtctgtattggccaaaaacagcggtggttt
ttattacaactgctttgtaatgaagaagatatcaatgtgcagcacagtaatacgccggag
ttcgatggttggcgctgggtcagctactggtatcctgtccggcaggtggtctcttttaaa
cgtgatgtttaccggcgtgtgatgaaagaatttgcttcagctgtgatgccaatacaggaa
aacctattgttgccgcgtccttcatattcttatcgtcgtaaaagaagttag
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