Photorhabdus asymbiotica: PAU_00589
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Entry
PAU_00589 CDS
T00941
Symbol
recC
Name
(GenBank) exodeoxyribonuclease v gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAU_00589 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_00589 (recC)
Enzymes [BR:
pay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PAU_00589 (recC)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAU_00589 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TniQ
PSD13_N
Motif
Other DBs
NCBI-ProteinID:
CAQ82681
UniProt:
C7BKJ5
LinkDB
All DBs
Position
663835..667209
Genome browser
AA seq
1124 aa
AA seq
DB search
MFKVYHSNQLDLLKELIAIFIGDHPLPDPFEQEVILVQSPGMSQWLQIQLAERIGISANI
SFPLPATFIWDMFTKVLSDIPKESAFSKDAMTWKLMALLPQLLPEAEFVALRHYLDQDLD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQQGQLIDGLSDNQLWQKRLWLELTEYTHQLQ
QPKWHRANLYQRFISTLENSADFSACCLPKRVFICGISALPPVYLQALQALGRHIDIHLM
FTNPCQYYWGDIQNYSFLAKMSNRKPRHYKSERELEYFKDPGNAQSLFNDEGEQDVSNPL
LASWGRLGRDNLYLLSQLEQSSDVHAFVELEPDNVLHQLQRDLLYLEDHAQIGSTKEAFE
NSLKKRLLNPLDRSLSFHVCHSPQREVEVLQDQLLRLLEDNPSLTPRDIIVMVADIDSYT
PYVQAVFGNASAERYIPFAISDRKARQAHSILQVFITLLDLPQSRFTTEQVLALLEVPAL
ANKFGIHEDGLRLLRRWVDESGIRWGLDDDNVEELSLPVTGQHTWRFGLTRMLLGYAMDS
RSGPWKDVLPYDNSSGLAAELAGQLAEFLMQLSYWRKILSESQTLGDWLPVCQQLLEAFF
ASDSETELVLAMIEQQWQRVIGNGLNACYQESVPLVLLRDELALRFDNEKISQRFLAGSV
NFCTLMPMRSIPFKVVCLLGMNDGIYPRSIPPLGFDLMAEKSQRGDRKRRDDDRYLFLEA
LISAEQFLYISYIGKSIRDNTECNPSVLVNELLDYVCQSFCLPGSEKFNVDESAANVRKH
LLCLHTRVPFAPGNFISGSYQQSYAAEWLPAASEQGAAHSEFCQPIEAEQIREITLDDLS
RFYRHPVRFFFQRCLKVNFVIEETELPEEEPFVLDNLRRYQFNQLLLNTLIEQQSPVLLF
NRLRAAGGLPFGAFGEVYWLKQQKEMQPLADKIREQQMEALSVDLHHDLGKVILTGRINK
VQPDGLLRWRPASLTANDGMQLWIEHLAYCLAGGQGESRSYGRDDSEWRFVPVASEQAKD
YLNQLVEGYQRGISVPLPLFCKSGWMWLSACMNKETGQIDDSDEIQLKAEGQLLKTWFGD
QGRKGEGDDPYVQRAFRQVDKLFLAKLKQEALNYLLPIARYQST
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggtttatcattctaatcagttagatcttcttaaagaattgatagcaatattt
atcggggatcatccgctgcctgatccgtttgaacaggaagttattttggtacaaagccct
ggaatgtcacagtggctgcaaatccaactagctgaaaggataggcatatcagctaatatt
tcgtttccacttccggctacttttatctgggatatgtttactaaagtattgtctgatatt
cctaaagaaagcgctttcagtaaggatgctatgacatggaaattgatggcattattgccg
caattattgccagaagcagaatttgtcgcactcaggcactaccttgatcaagatcttgat
aaacggaagattcatcaattggctggacgagttgctgacctgttcgaccaatatcttgtt
tatcgcccacaatggttggaaagttggcagcaagggcagcttattgatggtttgagtgat
aatcagttgtggcaaaaaagattatggctggaactgacggaatatactcaccagttgcaa
caacctaaatggcatcgtgctaacttatatcagcgttttatttctacactggaaaatagt
gctgacttttcagcttgttgtttacccaaacgagtatttatctgtggtatttcggcttta
ccgcctgtttatttacaggctttacaggcattgggacggcacattgatattcacctaatg
tttactaatccatgtcaatattattggggagatattcagaattattcttttctggcaaaa
atgagtaaccgtaagccacgtcactataagagtgagcgagaactggaatattttaaagat
cctggaaatgctcaatcattgtttaatgatgagggtgaacaggatgtcagtaatcctcta
ttagcgtcatggggacgattaggtcgtgataatctttatttattgtcgcaacttgagcaa
agttcagatgttcacgcctttgttgagttagaaccggataatgtattacatcagctgcaa
agggatctcctttatctggaagatcatgctcaaattggctcaacgaaggaagcatttgaa
aatagcctgaaaaaacggctgcttaatccattagatcgttctttatctttccatgtttgc
catagccctcaacgtgaagtggaagttttacaagatcagcttctaaggttactggaagat
aatccatcactgacgccaagagatattattgtgatggttgcagatattgacagttatacc
ccttatgttcaggcggtgtttggtaatgcctccgctgaacgttatattccatttgccatt
tctgatcgtaaggctcgtcaggcgcattcaattttacaggtatttattacactgcttgat
ttacctcaaagccgttttaccactgagcaggttttagcattgctagaagttccggcgttg
gcaaataaatttggcattcatgaagatgggctgcgtttattaaggcgttgggttgatgaa
tctggtattcgctggggattggatgatgataatgtggaagagttatccttaccggtaaca
ggccagcatacatggcgttttggattgactagaatgttattgggttatgcaatggatagc
cggtcaggtccttggaaagatgtgttgccttatgataactccagtggtttagccgcggag
cttgcaggtcaattggctgagtttttaatgcaactgagctattggcgcaaaattcttagt
gagagccagacattaggggattggttacctgtctgccaacagttgctggaagcatttttt
gcatcagacagtgaaactgaattagttctggcaatgatagaacagcagtggcagagagtc
ataggtaatgggttgaatgcctgctatcaggaaagcgtgccattggttttgttaagggat
gaattggcgctccgatttgataatgaaaaaattagtcaacgttttctcgctggatctgtc
aacttttgtaccctgatgccgatgcgttctatcccctttaaagttgtttgtctattgggg
atgaatgatggtatttatccccgttcaattccaccgcttgggtttgacttgatggcagaa
aaaagccaaaggggagatagaaaacgacgggatgatgaccgttatttattccttgaagct
ctgatatctgccgaacaattcctctatatcagttacattggtaaatccattcgtgataat
acggaatgcaatccttcagtactggttaatgaattgctggattatgtttgccaaagtttt
tgtttgccaggaagtgagaaattcaatgttgatgaaagtgctgctaatgtcagaaaacat
ctgctgtgtcttcatactcgtgttccatttgcgccgggaaattttatatcgggtagttat
cagcaaagttatgcagcagaatggctgccggcagcatctgaacaaggtgctgcacattct
gaattttgtcaacctattgaagcggaacaaattcgggagattacactcgatgatttgagt
cgcttttatcgtcatcctgttaggttttttttccaacgttgcttgaaagtaaactttgtc
attgaagaaacggaattaccagaggaagaacctttcgttttggataatcttcgacgttat
caatttaatcagttattgctgaatacgctgattgagcagcaatcacctgtattgcttttc
aatcgtcttcgtgctgctggaggattgccttttggcgcttttggggaggtttattggttg
aagcagcagaaagagatgcaacctttggcggataagattcgtgaacaacaaatggaagct
ttgtctgtcgatttacatcatgatttagggaaggtcattctgacagggcgaattaataag
gtacagccggatggcttgttacgctggcgtccagctagtttgactgccaatgatggcatg
caattatggattgagcatttggcttactgtcttgcgggtggtcagggtgaaagccgtagt
tatgggcgtgacgacagcgaatggcgttttgttcctgtagcttcagaacaagctaaagat
tatctaaatcaattggttgaaggttatcaacgaggaatatcggtgcctttaccgctgttt
tgtaaaagtggttggatgtggctttccgcatgtatgaataaagaaactggccagattgat
gacagtgatgagattcagttaaaagctgaaggtcagctactaaaaacatggtttggggat
caaggacgcaaaggtgaaggcgatgatccttatgttcagcgagctttcaggcaggttgat
aaattatttttggcaaaacttaaacaggaagcgctcaattatttgttaccgatagcgcga
tatcagagtacatag
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