Photorhabdus asymbiotica: PAU_00591
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Entry
PAU_00591 CDS
T00941
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAU_00591 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_00591 (recB)
Enzymes [BR:
pay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PAU_00591 (recB)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAU_00591 (recB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
DUF8767
Motif
Other DBs
NCBI-ProteinID:
CAQ82683
UniProt:
C7BKJ7
LinkDB
All DBs
Position
670110..673715
Genome browser
AA seq
1201 aa
AA seq
DB search
MSTEISVHKLNAFTLPLNGQRLIEASAGTGKTYTIGILYLRLLLGLGKNAAFPRPLSVEE
ILVVTFTEAATDELRGRIRENIHTLRLACIRNEVEGTESAYQQLLDEIPDKEQAAIWLLA
AERQMDEAAIYTIHGFCQRMLAHNAFESGILFEQTLIQDEHPLERQGCADFWRRHCYPLP
LSMARVISLDWSGPEALLAELHPYLQGDVPYIVDAPNSDETLLSRHEKITQFIYGVKCQW
NEAAGELHDLIAGSGVDKRSYSSKHLPNWLNRVTDWAQQPTEDYQLPKELEKFRQSVLVE
KTKKGNVPEHSLFVAIDNLYQQPLTLRDLIISKAIIEVRQSIRQEKLMRGQMGFGDLLTR
LDDALKGPGSDLLAQTIRQRYPVALIDEFQDTDPQQYRIFHTIYGNQPENGLLFIGDPKQ
AIYAFRGADIFTYIRARSQVSAHYTLETNWRSAESMVRAVNKLFMRSENPFLFEQIPFVE
VSAAEKNRGFAFSYGTKEQAALNFWLQPGEGVSTGDYEQMMSRFCAAQIRDWLQAGSEGR
ALLHKDEKVRPVTAADITVLVRSRKEAILIRDALNLLSIPSVFLSNRESVFDTAEAKDIL
WLLQAVLSPEKERILRSALASGLFGLTARQIDKLNHDEKAWDQLVEEFDGYFRLWQRRGV
LPMLRAVMTNHHIAENLLASYDGERRLMDVMHIGELLQEISLQLDSEHAVTRWLAQQISH
PDPQSENQQMRLESDRHLVQICTIHKSKGLEYSLVWLPFACNFRMQKQAIYHDRVSFDAC
LDIFPGEETIKLAEQERLAEDLRLLYVALTRSVYHCSVGVAPLIKGNKKKVGDTDLHQCA
LGYLLQNGAKGDADFLATCLKELSGDGIAVSSINDMGDHPWESQSQHDLGLSAKQFKRRI
QDDWRITSYSGLQNAVVHRGTVFPFAGEESIDVIVQSIAPKLDVDANGEKQIAEQYEMTP
HTFPRGASAGTFLHSILEELNFSQLPDEEWLVEQLKSAGFDEHWSEILRQWMVDIFTTPL
DDEGMQLSEIPLHHQQDEMQFYLPVEQLLRSQELDAVMRRYDPISARCPQLEFQQVKGML
KGFIDLVFCWQNRFYVLDYKSNWLGNDSQAYTREAMETAMIEHRYDLQYQLYTLALHRYL
RHRLVSYDYQQHFGGVIYLFLRGINKQQPGNGIFSCRPSAEFVNALDLLFSGNEQPEKEK
N
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacagagatatctgtccacaagcttaatgcattcactctgccgctgaatggtcag
cggctgattgaagcctctgccgggacgggtaaaacttacactattggtattctatatctg
cgtcttctacttgggttggggaaaaatgctgcttttcctcgccccttaagcgtggaagaa
attttggtagtgacatttactgaggcagcaacagatgagctacgtgggcgtatccgtgaa
aacatccatacacttcgccttgcttgtattcgaaatgaagtagaaggtacagagtctgcc
tatcaacagctattagatgaaatcccagataaagagcaggccgctatctggttgctggcc
gcagaacgacagatggatgaggctgcgatttataccattcatggtttttgtcaaagaatg
ctggcacataatgcctttgaatccggaatcttatttgaacagacattaattcaggatgaa
catccattagagaggcaggggtgtgccgatttctggcggcgacactgttatccgttacca
ttatcaatggcccgggttattagcctggattggagtgggccggaagcactgttggccgaa
ttacacccttatttgcaaggggatgtgccatatatcgttgatgcgccaaacagtgatgaa
acgctgttaagccgtcatgaaaaaattacacagtttatctatggagttaaatgtcaatgg
aatgaagctgctggagagttgcatgatttaatcgcgggttctggtgtagataaaagaagt
tacagtagtaagcacttaccaaactggctgaacagagttactgattgggctcagcagcct
acagaagattatcagttgccaaaagagctggagaaattccggcagtcagtattagtggaa
aagacaaaaaaaggtaatgtacctgagcactcactttttgttgcgatagataatttgtat
cagcaaccattgacattacgtgatttgattatctctaaagctattatcgaggttcgccag
tcaatccgtcaggaaaaattaatgcgtggtcagatggggtttggtgatttattaacccgc
cttgatgatgctttgaaaggccctggtagtgatttacttgctcagactatccgtcagcgc
tatccagttgcgttgattgatgaatttcaggataccgacccacagcaatatcgaattttc
cacaccatctatggcaatcagcctgaaaatggattgttatttatcggtgatcctaaacaa
gctatttatgcatttcgtggtgccgatatttttacttatattcgcgctcgctctcaggta
agtgctcactatactctagagacaaactggcgttctgctgagtcaatggtacgggcagta
aacaagttgtttatgcgttcagaaaatccctttttgtttgaacaaattccctttgttgag
gtttctgcggcggagaaaaaccgtgggtttgcttttagttatggtactaaggaacaagcc
gcattgaatttttggttacagccaggggaaggggtttctaccggagattatgagcaaatg
atgtcacgattctgtgcagcacaaattcgtgattggttgcaagcgggtagtgaagggaga
gctctgttacataaagatgagaaggttcggcctgttactgctgctgatatcactgttctg
gttcgtagcagaaaagaagccatactgatccgtgatgcacttaatctgttatctattcct
tctgtgtttctttctaatcgggagagcgtatttgataccgcagaagcaaaggatattctt
tggttactgcaagctgtgttgtcaccagagaaagaacggattttgagaagtgcgcttgcc
agtggtttatttggtttgactgctcggcagatagacaaactgaatcatgatgaaaaggcg
tgggatcagctcgttgaggagtttgatggctatttccgtttgtggcagcgtcgtggggtg
ttgcctatgttacgggcagtaatgacaaaccaccatattgctgagaatttacttgccagt
tatgacggtgaacggcgtttgatggatgtgatgcatatcggcgagttgttacaagagata
tctttacaactcgatagtgaacatgcggtcacccgttggttggctcagcaaatatcccat
cctgatccacaatcagaaaaccaacagatgcggctggaaagtgatcgtcatttggtacaa
atctgtactatccataaatctaaaggtctggagtactcgctggtatggttaccatttgcc
tgtaatttcaggatgcagaaacaggcgatatatcatgatcgtgtaagcttcgatgcttgt
cttgatattttccctggtgaggaaaccatcaaattggctgagcaagaacgattggcagaa
gatttgcgtttgctttatgtcgcattgacacgttctgtttaccattgcagtgtcggcgtg
gctccactgataaaaggtaataagaaaaaggtaggggatactgatctgcatcagtgtgct
ctgggttaccttctgcaaaatggtgctaaaggtgatgctgattttttggccacatgcctt
aaagaattaagcggagatggaatcgctgtatcatcaatcaatgatatgggtgatcatcct
tgggagtcacaaagccaacatgatttggggctgtcggcaaagcagtttaagcgccgtatt
caggatgactggcgtattaccagctattctggtttacaaaacgccgttgttcatcgcggt
acggttttcccttttgctggcgaagaatctattgatgtcattgttcagtctattgcacca
aaattggatgttgatgctaatggtgaaaagcaaatagcagaacaatatgaaatgacgcca
catacgtttccacggggagcctctgccggcacttttttgcattcgatattggaagagctc
aatttcagccaattacctgatgaggaatggttggttgaacaactgaaatcagctgggttt
gatgaacattggagtgagatattacggcagtggatggtagatatttttacgactcccttg
gatgatgaaggtatgcagctttcagaaattccgcttcatcatcagcaagatgaaatgcag
ttttatttgccggttgaacaacttttacgatcccaagagctagatgcagtaatgcgtcgc
tatgatcctatttctgcccgttgtccccaattggagtttcagcaagtgaaaggaatgctg
aaagggtttattgatttagtcttctgttggcaaaatcggttctatgtgttggattacaaa
tcaaactggttgggaaatgatagccaggcgtatacccgtgaagcgatggaaaccgctatg
attgagcatcgctatgatttgcaatatcagctttatacactagcactgcatcgttatttg
cgtcacaggctggttagttatgattaccagcaacattttggcggagtgatttatttgttc
ctgagaggaattaataaacaacaaccgggaaatggtattttcagttgtcggccatcggcc
gaatttgttaatgctttggatctgctgtttagtggcaatgaacaacctgagaaagagaaa
aactga
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