Photorhabdus asymbiotica: PAU_00659
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Entry
PAU_00659 CDS
T00941
Symbol
dnaE
Name
(GenBank) dna polymerase iii alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03030
DNA replication
pay03430
Mismatch repair
pay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAU_00659 (dnaE)
03430 Mismatch repair
PAU_00659 (dnaE)
03440 Homologous recombination
PAU_00659 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pay03032
]
PAU_00659 (dnaE)
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_00659 (dnaE)
Enzymes [BR:
pay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAU_00659 (dnaE)
DNA replication proteins [BR:
pay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAU_00659 (dnaE)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAU_00659 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAQ82751
UniProt:
C7BLA5
LinkDB
All DBs
Position
745721..749203
Genome browser
AA seq
1160 aa
AA seq
DB search
MADPRFVHLRVHSDYSMIDGLAKTSPLVKKVAQLGMPAFAITDFTNLCGLVRFYGSAHGA
GVKPIIGADFYMESELLGDEYANLTILARNNTGYHNLTLLISEAYQQGYGAAGPTIKQKW
LVSRKEGLILLSGGRMGDVGKFLLRGNRAMVDQCLEFYQEHFPDCYYLELIRTGRVDDEN
YLHAAVALATEKNLPVVATNDVCFIDKEDFDAHEIRVAIHDGYTLADPKRPKNYSPQQYL
RSEQEMCELFSDIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGEMSTENYLIEKSKQGL
EERLTFLYPDPEVRAEKRPEYDERLDVELRVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD
IYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLEKAFVAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDPEGLNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKGLEPIDIAAIPLNDNKSFDML
QRAETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLQPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKKLGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLIDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARKKDGYFRELFDLCARVDTKKLNRRVMEKLIMSGAFDRLGPHRAALMS
SLEDALKAADQHAKAEAIGQTDMFGVLAEAPEEVERSYANVSQWPEQVVLDGERETLGLY
LTGHPITRYLKEIERYTNGLRLKDVNPTPRGQVTTVVGLVLASKVIMTKRGNRIGLCTLD
DRSGRLEVMLFSDALERHRHLLEQDRILIATGQVSFDDFNGGLKMTARELMDISEAREKY
ARGLAISLLDRQIDDQLLNRLRGTLEPYRSGTIPVHLYYQREDARARLRFGATWRVTPTD
NLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccccgttttgtacacttacgtgttcatagcgactattcaatgattgatggc
ttagccaaaactagccctttagttaaaaaagtggctcagttaggtatgccggcttttgcg
atcactgattttactaacctatgtgggttggtgagattttatggtagtgctcatggggct
ggggtaaaaccgattattggtgctgatttttatatggaaagtgagctgctcggggatgag
tatgctaatttgaccattcttgcccgtaataatactggctatcataacttgactttactg
atatcagaggcttatcagcaggggtatggtgctgccggtccaacaattaaacagaaatgg
ctggtaagccgcaaagaagggcttatcctgctctctggtggtcgcatgggggatgtgggc
aaattcctgttgcgcggtaatcgggccatggtagaccaatgccttgagttttatcaggaa
catttccccgactgctattatctggaactaattcgtactggtcgtgtagatgacgaaaat
tatcttcatgcagcggttgcattggcaacagaaaagaatctgcctgttgttgcgactaat
gatgtttgctttatcgacaaagaagatttcgatgcgcatgaaattcgtgtagcgattcat
gatggctatacattggctgatcccaaacgtccaaaaaattacagtcctcagcaatacttg
cgtagtgaacaggaaatgtgtgagttattctctgatattcctgaggcgctggaaaacagt
gtagaaattgccaagcgttgtaatgtcactatccgtcttggtgaatatttcctgccacaa
ttcccgacaggggaaatgagtactgaaaattatctgattgagaaatctaagcaaggatta
gaagagcgcttgacatttctctatccagatcctgaagtacgagcagaaaaacgccctgaa
tatgatgagcgacttgatgttgagcttcgggttatcaaccagatgggattcccaggctac
ttcttgatcgtgatggaatttattcagtggtcgaaagacaacggtgttcctgtggggccc
ggtcgtggttccggtgcgggttctttagtggcttatgccctgaaaataaccgatctcgat
cctttggagtttgacctgctgtttgaacggttccttaaccctgaacgtgtttctatgcct
gattttgacgtcgatttctgcatggaaaagcgcgatctggtgattgatcatgtggctgat
atatatggccgtgatgccgtatctcagattatcacttttggtacgatggccgcgaaagcc
gtaatccgggatgttggtcgtgtgctggggcatccatacggatttgttgacagaatttct
aaattaataccgcttgatccgggaatgaccctggaaaaagcatttgttgcagagccacaa
cttcctgaaatctatgaagcggatgaagaagttaaggcgctgatagatatggcgcgtaaa
ttggagggtgtcacccgtaacgccgggaaacacgcgggtggggtcgttatcgcaccaact
aagatcactgatttcgcgcctctctactgtgatccggaaggtttgaacccggtgactcag
tttgataaaaatgatgtggaatatgctgggttagtgaaattcgacttcctcggattgagg
acgctgactatcatcaactgggcgttagagatgatcaacgcacgcagagcgaaaaaaggt
ttggagccgattgatatcgcagcgattccactaaatgacaacaaaagttttgatatgctg
caacgggctgaaacgacagcggtattccagcttgaatcccgtggtatgaaggatcttatc
aaacgtctgcggcccgactgcttcgaagatatgattgcgcttgtggcattgtttcgtcca
ggccctttgcaatcaggcatggttgataacttcattgatcgtaaacatggtcgggaagag
atttcatacccagatatacagtggcagcacgaatctttacagcctgtgttggagccaact
tacggcataatcctttatcaggaacaagtgatgcagattgctcaggtactggcgggatat
actctcggtggtgcagatatgcttcgtcgggcaatgggcaagaaaaagccggaggaaatg
gctaagcagcgttctgtatttgaggaaggtgccaaaaaactcggcattgatggcgaattg
gcgatgaaaatctttgacttggtagagaaatttgccggttatggatttaataaatctcat
tctgctgcgtatgcgctggtttcttatcaaactttatggctgaaagcacattatcctgct
gaattcatggctgcggtaatgactgctgatatggataatacagaaaaagtcgttggattg
attgatgaatgctggcgcatggggctgaaaatcttaccacctgatattaacagcggttta
tatcatttccatgttaatgatgatggagagatcgtatatggcatcggtgcgattaaagga
gtaggtgaaggcccgattgaagcgatcatcgaagccagaaagaaagacggttattttaga
gaactgtttgatttatgtgcccgtgttgataccaagaaattaaatcgccgggtgatggaa
aaactgatcatgtcaggggcatttgaccgtctggggccacaccgcgcagctttgatgtct
tctttggaagatgccttgaaggcggcagatcaacatgccaaagcagaggctattggtcag
actgatatgtttggtgtgttggcagaagcgccggaagaagttgagcgctcttatgccaat
gtttcccaatggccagaacaggtagttcttgacggtgaacgagaaacgctgggactctat
ttaactgggcacccgatcacccgttatttaaaagaaattgagcgctatactaatgggctg
cggttaaaggatgtgaatccgacaccacgtggtcaagtaacaactgtggtaggtttggtg
ctggcatccaaagtgattatgaccaaacgaggtaaccggataggtctttgtacactggat
gaccgctcaggtcgcttggaagttatgttattttccgatgccttggaaagacaccggcat
ttgctggaacaagatcgaatattgatagctacggggcaggtcagctttgatgactttaat
ggtggtcttaaaatgacagctcgtgaattaatggatattagcgaagcgcgtgaaaaatat
gcacgtggtcttgctatctcgctgttggacaggcaaattgatgatcaattgttaaaccgt
cttcgtggcacattggaaccgtatcgttcgggtacgataccggttcatctttattaccag
agggaagacgcccgcgcccgtttaagattcggcgcgacgtggagggtaacgccaacggat
aaccttctgacagatctgcgaactctgctgggtaatgagcaggtagaattagaatttgac
taa
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