Photorhabdus asymbiotica: PAU_00688
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Entry
PAU_00688 CDS
T00941
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pay
Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pay03016
]
PAU_00688 (truD)
Enzymes [BR:
pay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PAU_00688 (truD)
Transfer RNA biogenesis [BR:
pay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAU_00688 (truD)
Prokaryotic type
PAU_00688 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CAQ82780
UniProt:
C7BLD4
LinkDB
All DBs
Position
781455..782507
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AA seq
350 aa
AA seq
DB search
MMVLAELNWLYGQPEATGILKASPEDFIVCEDLGFSPDGEGEHLMVHIRKTGCNTQFVAD
SLARFAGVSSKSVSYAGLKDRHAVTEQWFCLHLPGKQDPDFTSFQLEGCEVLATERQKRK
LRIGALKGNSFTLILREISHHPFVENRLQLIQQGGVPNYFGEQRFGRDGQNLVQAQRWAN
NEIRVRERNKRSFYLSASRSAMFNTVASARIARSQQQQVINGDALQLTGRGSWFVASEAE
LPALQQRVIDGELQITAPLPGDGELGTQHQSADFERQYLQPYESLWELIKRERVDCSRRA
ILVQPQNLSWEWLDNATVKISFWLPAGSFATSVVREIINQDQNDVTNIIE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgatggtattggctgaattaaactggctgtatggacaaccggaagcaaccggaatatta
aaagcttcgccagaagattttattgtgtgtgaagatttggggttttctcctgacggggaa
ggagagcacttgatggtgcatatccgtaaaaccggttgcaacactcaatttgttgcagat
agcctcgctcgttttgctggagtatcttctaaatcggttagctatgcgggtttaaaagac
cgtcatgcagtgacagaacagtggttttgcttacacctaccgggtaaacaagaccctgat
tttacctcgtttcagcttgaaggatgtgaagttctggcgacagagcgtcagaaacgtaaa
ctccgcattggggcactaaaaggaaattcattcacgctgattttacgggaaatcagtcat
cacccgtttgttgaaaatagattacaactgattcagcaaggcggagtgcctaattatttt
ggcgaacagcgttttgggcgagatggacaaaatctggttcaagcacagcgttgggcaaat
aatgaaatccgtgtaagagagagaaataaacgtagtttttatctttcagccagccgcagt
gctatgtttaatacggtggccagtgcgcggattgctcggagtcagcaacagcaagtgatt
aatggtgacgctttacaattgacaggacgaggcagttggtttgtggctagcgaagccgag
ttgcccgcattgcaacagcgggtcattgacggtgaactacagataacggctccgttgcct
ggcgatggtgaattaggaacacagcatcagtctgcggattttgaacggcagtatttgcag
ccttatgagtcattgtgggaactcattaagcgtgaaagagtggattgttcccgcagggcc
atactggtgcaacctcagaacctgagttgggaatggttggataatgccaccgtaaaaatc
agtttctggttacctgctggtagttttgctaccagtgtggtcagggaaattatcaatcag
gatcaaaatgatgttacgaatattattgagtaa
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