KEGG   Photorhabdus asymbiotica: PAU_00706
Entry
PAU_00706         CDS       T00941                                 
Symbol
ygcB
Name
(GenBank) conserved hypothetical protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
pay  Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:pay00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pay02048]
    PAU_00706 (ygcB)
Enzymes [BR:pay01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PAU_00706 (ygcB)
Prokaryotic defense system [BR:pay02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    PAU_00706 (ygcB)
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 AAA_22 ResIII Helicase_C DEAD
Other DBs
NCBI-ProteinID: CAQ82798
UniProt: B6VMQ6
LinkDB
Position
805738..808455
AA seq 905 aa
MEIPIYFQYWGKSKQEPEANNADYHLLPYHCLDVAAVGIELLSLERSLTKDLASFLALSA
KQLQSIASFVLALHDIGKFASAFQRLFSHQAVGLFKPYCLKKYNGRYFSHARLGLYFWEN
IKTQLLKRLVNIEGIEQGEQQEMLDTLMVFMDCVLGHHGQPIDKTDYKTIKRFTEPHNFN
AATLFTHHLIELLQPEFPIEKLQSKEWRRRLEQVSWQFAGITVLADWIGSDNHYFKYQSE
PMPLTDYWQYAQIVAKKAVLATELGKVPIVKPFISIQEYYGFAATPLQQWAESIPIDNSP
QLFILEDVSGAGKTEAALALTHRLMQAKAADGFYFGLPSMATSDAMFNRVVEHYQQMLST
QDGSGPNIVLAHDVRRMNEQFRAAALVSGYTDSRDGKKDITASALCSQWLADSRKKALLA
PIGIGTIDQALLAVLPRRHQSLRLLGLNHKVLIVDEVHAADEFMFNLLENLLALHLYQGG
SAILLTATLTLKQRQRLADIWLNTGGLNSQLLRKIDFPLATKIDLNLVAPIIEQPLSSRK
DVNREVKVEFLNSFGSCVEKVLAAIVQGQCVVWIRNTVDDAIEAYQALRNLLTEPERCLL
FHSRFVLQHRKEIESRVLTIFGKNSYGEMRRGKALIATRVFQESLDTDADVMISDICPID
DLIQRSGRLHRHTRDSDGIYQHGIKDSRSAPVLFVHAPNWKENPESDWLSHNFRNTQYVY
RSPARLWLGMRVLRKLGAIRMPTDARQLIEAVYGYDDEQIPEALRHREDELIGEERSQAA
KAKSYWLQWQLYGYCDRSADSWYEDNSGINTRYCDIETVEVLLLRQTDSGQLVPWVNAAE
FSVPLSTVKLSKNKYADKLARIPTKLIPALNRLQQRYHQIKYLQPWLPEKDPNFTYFSTI
GFCKK
NT seq 2718 nt   +upstreamnt  +downstreamnt
atggaaataccaatttattttcaatactggggtaagtcgaagcaagagccagaggctaat
aatgcagattatcatctacttccctatcattgtttggatgtggctgcggtaggaatagag
ctactttctttagaaagatcattgaccaaagatcttgctagttttctggcattatctgcg
aagcaattacaaagcatagcctcttttgtattagctttgcacgatattggtaaatttgcg
tctgcttttcaaagattgttttcccatcaagcagtcggtctgtttaaaccctattgcttg
aagaaatataatggccgttattttagccatgctcgtctggggttatatttttgggaaaat
atcaaaactcagttacttaagagactcgttaatattgaaggtattgagcaaggagagcag
caagaaatgcttgataccttaatggtgttcatggattgtgtgttaggacatcatggccag
ccaattgataaaacagactataaaacgattaaacgttttactgaacctcataacttcaat
gctgctacactctttactcatcatttaattgaattattacaacctgagtttcctattgaa
aaactacaatctaaagaatggcgacgacgattagagcaagtgagttggcagtttgccggt
attacggtattggcggattggattggttctgataatcactattttaaatatcagtctgaa
cctatgccattaacggattattggcaatatgcgcaaatagtggcaaaaaaagcggttctg
gcgacagaattaggtaaggtgccaatagtaaaaccatttatttccatacaagaatattac
gggtttgccgcaactcctttgcaacaatgggctgaatcaataccaatagataattctccc
caattattcattttggaagatgtatcaggggcaggaaagacagaagcggcattagcgctc
acacatcgtttgatgcaagcaaaagctgctgatggtttttatttcggtctgcctagtatg
gcgacatccgatgcaatgtttaaccgagtggttgagcattatcaacaaatgctatcgaca
caagatggtagcgggccaaatattgttttggctcatgatgtacggaggatgaatgagcaa
tttcgtgccgctgctttggtctcaggatatacggatagcagagatggtaaaaaagatatc
acggcttcagcgctgtgtagtcagtggttagcagactcacgtaaaaaagcactgttagcg
cctattggtatcggaaccattgatcaagcattattggctgtattaccaaggcgtcatcaa
tcattgagattattggggcttaatcacaaggtattaatcgttgatgaagtccatgctgct
gatgaatttatgtttaatttactggaaaatttattagcgttgcacctttatcagggtggt
tcggctattttattaacagcaacactgacccttaaacagcgtcaacgtttagcggatatt
tggttgaatacgggtggattgaattctcaattactgcgaaaaattgatttcccgctagca
acaaaaatagatttaaaccttgtagcacccattattgaacaaccattatcgagtcgaaaa
gacgttaatcgggaagttaaggtcgagttcttaaatagctttggaagttgtgttgaaaaa
gtattggccgcaattgtacaagggcaatgcgtagtttggattcggaatacagtagatgat
gcaatcgaagcttatcaagcgttgcgaaatttgctcactgaacctgagcgttgcttatta
tttcatagccgatttgtactgcaacatcgaaaagaaattgaaagtcgtgtgctgacgatc
tttggtaaaaatagctatggtgagatgcgtcggggcaaggcgttaattgctacgcgagtg
tttcaggaaagtttagatactgatgccgatgttatgatttcagatatttgtcctatcgat
gatctgattcagcgatctggacgtttacatcgccatacgcgtgatagtgatggtatttat
caacatggcattaaagactcacgctctgctccagtactctttgtccatgctcctaactgg
aaggaaaatcctgaatcagattggttaagccataatttccgtaatacacaatatgtttat
cgatctccggcacgtttgtggttaggcatgcgagtattgagaaaattaggggcaatacgt
atgcctacggatgcccgccaattaattgaagcagtttatggttacgatgatgaacaaata
cctgaagcgctaagacatcgagaagatgaattaattggcgaagagcgaagtcaggcagct
aaagctaaatcttattggttgcaatggcagttatatggttactgtgatcgaagtgcggac
agttggtatgaagataattcaggtattaatacgcgctactgcgatattgaaactgttgag
gtgttattacttagacagaccgattcgggacaactcgtaccatgggtaaatgcggctgag
ttttcagtgccattaagtacggttaaattatctaaaaataaatatgcggataaattagcc
cgaattccgactaaattaattccggcgctcaatagattgcaacagcgataccatcaaatt
aaatacttgcaaccttggttgccagaaaaagatccgaattttacttatttttcaacaata
ggcttttgtaaaaaataa

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