Photorhabdus asymbiotica: PAU_00808
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Entry
PAU_00808 CDS
T00941
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAU_00808 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pay03019
]
PAU_00808 (pcnB)
Enzymes [BR:
pay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PAU_00808 (pcnB)
Messenger RNA biogenesis [BR:
pay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PAU_00808 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CAQ82900
UniProt:
C7BMR4
LinkDB
All DBs
Position
complement(908241..909812)
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AA seq
523 aa
AA seq
DB search
MISYLSRCTIFNRVANFCRNLLIREGKINRELQAASERPVTVSDRSSQEEYVTLQSNHQN
TCQLSSSVNAQEEVEQENLHSDLPITVISREQHNISRRDISENALKVLYRLNKSGFDAYL
VGGGVRDLLLGTKPKDFDIATNATPEQVRKLFRNCRLVGRRFRLAHIMFGPEVIEVATFR
GPHEQTDANNEKNQSQQAQSGMLLRDNTFGSIEEDAMRRDFTINSLYYGINDFSLRDYVG
GLNDLETGVIRLIGDPETRYREDPVRMLRAIRFASKLNMTISEDTAEPISRLAFLLSHIP
PARLFEESLKLLQTGQGYSTYKRLREYHLFQPLFPLVERYFTANNDSPMEHMLNQVLKNT
DYRLQNDKRVNPAFLFAAMLWYPLIEHAEKLSQESGLTYYDSFALAMNDILDEQCQSIAI
PKRLTTIMRDIWQLQLRLPRRHGKRANKLMEHPKFRAAYDLLELRANVENRNELKDLAHW
WGEFQQVNASQQRCMISELGNDIVRRRTRTRRYYKPKLGRDSR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgattagttacttatcgaggtgtaccatttttaaccgagtagcaaatttctgccgtaat
ttattgatccgcgagggaaaaattaaccgcgagctacaggcagccagtgaaaggccagtc
accgtatctgaccgttcttctcaggaagagtacgtaactcttcaatctaatcaccaaaat
acctgtcagctttcatccagcgtgaacgctcaagaggaagttgaacaggaaaatcttcat
tcagatttacccataacggtaatttcacgggaacaacacaatatttcccgcagggatatc
agtgaaaatgcactgaaggtactttaccgtttaaataaatccggttttgatgcctatttg
gttggcggcggtgtccgtgacttgctgctaggcacaaaaccgaaagattttgatattgca
actaatgcaacaccagaacaggtccgtaaattattccgtaactgccgtctggtgggacgc
cgtttccgcttagctcatattatgtttggtccggaagtgatcgaagttgcaacattccgt
ggtccgcatgaacaaactgatgctaataatgagaaaaatcagtcacaacaggctcagagc
ggtatgctgttacgggataacacctttggttccattgaagaagatgctatgcgccgtgat
ttcacgatcaacagcctctattatggcatcaatgacttctctctgcgtgattacgttggt
ggtcttaatgatctggaaactggcgttattcgtctgattggtgatccagaaacccgctat
cgggaagatcccgtaagaatgctgcgggcaattcgtttcgccagcaaactgaatatgacc
atcagcgaagataccgccgaacctatttctcgtctggcttttctattgagtcatattcca
ccagcccgcctgtttgaagagtctttgaagcttttgcaaacaggccaaggctacagcact
tataagcggctacgcgaatatcatctgttccagccactattcccattggttgaacgctat
ttcaccgcaaataacgattctccaatggaacatatgcttaatcaggttctgaagaatacc
gattaccgattacaaaatgataaacgggttaacccggcgtttttgttcgctgcgatgctt
tggtatccactcattgaacatgctgaaaaactatctcaggaaagtgggttaacttactac
gactcttttgcattagcgatgaatgatattctggacgaacagtgccaatctattgccatt
cctaaacgtctgacaaccatcatgcgtgatatctggcaattgcagttacgtctgccgcgc
cgtcatggtaaacgggcaaacaaattgatggagcatcctaaatttcgtgccgcctatgac
ctgctggaactgcgtgccaatgttgaaaaccgtaatgagctaaaagaccttgcccactgg
tggggagaattccagcaagtcaatgcctcacagcaacggtgtatgatttccgaactgggc
aatgatattgttcgtcgccgtacacgaacacgccgttactacaaacccaaattaggcagg
gatagcagataa
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