Photorhabdus asymbiotica: PAU_01233
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Entry
PAU_01233 CDS
T00941
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pay
Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pay03000
]
PAU_01233 (prpR)
Transcription factors [BR:
pay03000
]
Prokaryotic type
Helix-turn-helix
Other families
PAU_01233 (prpR)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA
AAA_2
HTH_23
AAA_16
HTH_11
HTH_50
HTH_Tnp_ISL3
NACHT
DUF815
HTH_30
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
CAQ83325
UniProt:
B6VKA9
LinkDB
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Position
complement(1406018..1407700)
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AA seq
560 aa
AA seq
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MAETQSAERDNSDKPVIWTVSVSRLFDLFRDITPEFDHQADITPIQLGFENAVQHIRKRL
TTERCDAVLCAGSNGAYLKSRLSVPVIIAKASGFDFMQALARARQISSRIGVITYQNTLP
ALEEFQQRFNLRIEQRSYVTEEDARAQVNALKAIGIKVIVGAGLITDLAYEAELVGVFVY
SADSIRQAFHDALDIARMTKLDRAAMAVYPTENTLHIRHTLNDIQGNSAAMEHIRNTIML
YARSPATVLIQGESGTGKELVAQAIHHEYALRYGQVTGKYQRPFVAVNCGAIAESLLEAE
LFGYEEGAFTGSRRGGRAGLFEVAHRGTLFLDEIGEMPLPLQTRLLRVLEEKSVVRVGGH
RPIAVDVRIICATHCDLDTWVQEGRFRTDLFYRLSVLRINIPALRERGNDISLLALEYLR
RAFAALNLPISQSRVQELSACQEALQTYHWPGNVRELRNLMERLTLYLSAHPKHTLTPAL
ILALSPERQLTSRLAEKSTKSLPSLAKQSSHVASLSVHETLKRFAGNHRATAEYLGVSRT
TLWRRLKQERTGNTETQDKR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacacaatcagcagaacgcgataacagtgacaaaccggtcatttggaccgta
tcggtttcccgtctttttgatctattccgagacatcacaccggagttcgatcatcaggca
gatatcacacccattcaacttggttttgaaaatgcggttcagcacatccgtaaacgctta
acaaccgaacgttgtgatgcggtgctctgtgccggctccaatggagcctatctgaaaagc
cgtttgtcagtacctgttatcattgctaaagccagcgggtttgattttatgcaggcatta
gctcgtgcacgacaaatcagctcccgcattggcgttatcacctaccaaaataccttgcct
gcactggaagaatttcagcaacggttcaacctacgcattgaacagcgcagctacgtcacg
gaagaagatgctcgtgcccaagtcaatgcattaaaagccatcggcattaaagtgattgtt
ggtgccgggctgattaccgatctcgcctatgaggctgaacttgtgggtgtctttgtctat
tctgcggattctattcgccaggcattccatgatgcactggatatcgccagaatgactaag
cttgaccgggctgcaatggctgtctatccaacagagaataccttacatatccgccatact
ctcaatgatatccaagggaattcagcagcgatggaacatatacgcaacaccatcatgcta
tatgcccgttcgcctgccacagtgctgatacagggagaaagcggcacagggaaggaactt
gtcgcacaagctattcaccatgaatatgccctgcgatacggtcaagttactggtaaatat
cagcgtccgtttgttgccgttaattgcggcgctattgctgaatccctactggaagctgaa
ctgtttggttatgaagaaggcgctttcactggctcccggcgtggagggcgcgccggtctt
tttgaagtcgcccatagaggcacgctatttctggatgaaattggtgaaatgccactacct
cttcagacacggctattgagagtgttggaagaaaaatctgttgtcagagtaggagggcat
cgtccaattgccgttgatgttcggatcatttgtgccacccattgcgatttggatacctgg
gtccaagaagggcgttttcgaacagacctgttctaccgcctgagtgtattacgaatcaac
attccggctctcagggaaaggggtaatgatattagtctattggcgctagaatatctgcgg
cgagcatttgctgcattaaatttgccaatatcacaatcaagagtacaagaactttctgcc
tgtcaggaagcattacaaacctatcattggcccggtaatgtccgggaactgcgtaatctg
atggaacggctcacgttatacctcagtgcccaccctaagcatacattgactccagcattg
atattagccctttcaccggagcgccagcttacatccaggctggcagaaaaaagcacgaag
tccctcccttccctggctaagcaatcttcacatgttgcatcactttcagttcatgaaacc
ttgaaacgatttgctggcaatcaccgtgcaacagcggaatatctgggggtcagccgcact
acgttgtggagacgattaaaacaggaaaggaccgggaatacggaaacacaggacaaacgt
tga
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