Photorhabdus asymbiotica: PAU_01983
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Entry
PAU_01983 CDS
T00941
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease iii (exonuclease iii) (exo iii) (ap endonucleas vi)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAU_01983 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_01983 (xthA)
Enzymes [BR:
pay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PAU_01983 (xthA)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PAU_01983 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
CAQ84075
UniProt:
C7BID7
LinkDB
All DBs
Position
complement(2220284..2221090)
Genome browser
AA seq
268 aa
AA seq
DB search
MKFISFNINGLRARPHQLAAIVELHQPDVIGLQETKVHDELFPLEEVNKLGYHVFYYGQK
AHYGVALLTRQAPIAVHRGFPGDDEDSQRRIIMADLETPHGLLTVINGYFPQGESRDHPV
KFPAKEKFYQDLQSYLEQNLSPQSQVLIMGDMNISPTDLDIGIGDNNQKRWLKTGKCSFL
PEERDWMDRLKDWGLVDTFRHLNPECNDQFSWFDYRSKGFDDNRGLRIDLLFASKPLAER
CIATGIDYKIREMEKPSDHAPVWAEFEI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatctcttttaatattaatggattacgtgcccgcccccatcagttagctgca
atcgtagagctacatcaacccgatgttataggtttacaggaaacaaaagttcatgatgag
ctgtttcctttagaagaggtcaacaagcttggctatcatgtattttattacggtcagaaa
gcccattacggcgttgcgctgctaacacgtcaggctcctattgctgtacaccgtgggttt
ccaggggatgatgaagattcccaacgccgtattatcatggcagacctggaaacccctcac
gggctattaacagtcattaatggctatttcccacaaggggaaagccgtgaccatccagtg
aaatttcccgcaaaagagaagttttatcaggacctacaaagctatctggaacagaattta
tccccccagtcgcaagtacttatcatgggtgatatgaatatcagtccgacagatttggat
atcgggattggtgataacaaccaaaagcggtggttaaaaacaggtaaatgttcttttctg
ccagaagaacgagattggatggatcgtctgaaagattggggcctggttgatacattccgg
cacctgaatccagaatgtaacgaccaattttcctggtttgattatcgttcaaaagggttt
gatgataaccgcgggctgcgtattgatttgctgttcgcaagtaaaccattagcagagcgc
tgtattgctacaggtattgattacaaaatccgtgagatggaaaaaccttcagatcatgca
cctgtctgggcagaatttgaaatttga
DBGET
integrated database retrieval system
