Photorhabdus asymbiotica: PAU_02432
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Entry
PAU_02432 CDS
T00941
Symbol
rnd
Name
(GenBank) ribonuclease d (rnase d)
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pay
Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pay03016
]
PAU_02432 (rnd)
Enzymes [BR:
pay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PAU_02432 (rnd)
Transfer RNA biogenesis [BR:
pay03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PAU_02432 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CAQ84524
UniProt:
B6VL44
LinkDB
All DBs
Position
complement(2777105..2778232)
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AA seq
375 aa
AA seq
DB search
MNYQLITTDAQLQQVCERAKEYAKIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLNI
TNWQPFRELITNPQILKFLHAGSEDLEVFLNAFQCLPEPMIDTQVLAAFIGHPLSCGFAA
LVAEYIHVELDKSESRTDWLARPLSEKQCEYAAADVYYLLPLADILITATTQAGYMEAAI
GECELISQRRREILAPECAYKQIGNICQLRPQQLACLKMLAAWRLNQARERNLAVNFVIR
EENLWQVARYMPTSLAELDALGLSGQEIRCHGRRLLAMVAESENIPESECPPPVTNLIDQ
PGYRKAFKDIKALISQVSEQHKFNSELLASRRQINQLLSAHWKLKQLNGKPELLSGWRGG
LLAEPVAEILANYPN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcaccacagatgctcagttgcaacaagtctgcgaaagagcgaaa
gaatacgcaaaaatagcattggatactgaatttgtacgcacacggacgtattacccccaa
ttaggtttgatacaactgtatgatggcgaacaactttctctgatagatccgcttaatatc
actaactggcaaccttttcgtgaattaattaccaatcctcagatattgaagtttctgcat
gctggtagtgaagatttagaagtctttttgaatgcttttcaatgtctgccggaaccgatg
attgatactcaagtccttgctgcttttatcgggcatcctctttcatgtggttttgccgca
ttagtggctgaatatatccatgtcgaattggataaaagcgaatctcgtactgattggctt
gctcgtccattaagtgaaaagcagtgcgaatatgcggcagcggatgtttattatctgctg
cccttggctgatatcttgataactgcgacaacccaggccggatatatggaagcggcgata
ggggagtgtgagcttattagtcaacgccgcagggagatattagccccggaatgtgcttat
aaacagataggtaatatctgtcaattacgaccccaacagctggcgtgtttgaaaatgctg
gcggcatggcgtttgaatcaggccagagagcgtaatttggcggtgaactttgttattcgt
gaagaaaacttatggcaggtagcacgttatatgccaacctctttagcagaattggatgcg
ttgggattgagtggacaggagattcgttgtcatgggcgtcgtttgttggcaatggtggct
gaaagtgaaaatattccagaaagcgaatgtcctccaccagtgacaaacttgattgatcaa
cctggttatcgcaaagcgtttaaggatattaaggcactgatcagtcaggtaagtgaacag
cataaatttaattcagagttactggcgtctcgtcgtcagattaatcagttactcagtgct
cactggaagttgaagcaattaaatggcaaacctgaattgctcagtggatggcgaggagga
ttgctggctgaaccagtcgcagagattctggcgaattatcctaattaa
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