Photorhabdus asymbiotica: PAU_02936
Help
Entry
PAU_02936 CDS
T00941
Symbol
uvrB
Name
(GenBank) uvrabc system protein b (protein uvrb) (excinuclease abc subunit b)
KO
K03702
excinuclease ABC subunit B
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAU_02936 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_02936 (uvrB)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAU_02936 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PAU_02936 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
SBDS_domain_II
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAQ85024
UniProt:
C7BRZ4
LinkDB
All DBs
Position
complement(3394020..3396041)
Genome browser
AA seq
673 aa
AA seq
DB search
MRYLMSKVFKLHSDFEPGGDQPEAICQLQEGLEDGLAHQTLLGVTGSGKTFTIANVIANL
NRPTMVLAPNKTLAAQLYSEMKDFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVN
EHIEQMRLSATKALLERRDVIVVASVSAIYGLGDPDSYLKMMLHLTNGMIIDQRSILRRL
AELQYTRNDQVFQRGTFRVRGEVIDIFPAESDEHALRVELFDDEVERLSLFDPLTGQVQY
NVPRYTVYPKTHYVTPRERIIQAMEQIKIELEQRRKVLLANGKLLEEQRITQRTQFDLEM
MNELGYCSGIENYSRYLSGRTEGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRS
RKETLVEYGFRMPSALDNRPLRFEEFEALAPQTIYVSATPGKYELEKSGGDVVEQVVRPT
GLLDPEVEVRPVTTQVDDLLSEIRIRAVKNERVLVTTLTKRMAEDLTEYLEEHGERVRYL
HSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLI
QTIGRAARNLHGKAILYGDKITDSMAKAIGETERRRTKQQIFNAERGIVPKGLNKKIGDI
LQIGQPAGGKGKTKGKAVATTEAFSKLSAKELENKIRELEAKMYQHAQDLEFELAANVRD
QVQILREQFIANS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgagatacctaatgagtaaggtgttcaaattacattctgacttcgagcctggtggtgat
caaccagaggccatttgccaattgcaggaagggttagaggacgggcttgcccatcagact
ctactaggagtaacagggtcaggtaaaacattcactattgctaatgtgatagctaattta
aaccgaccaaccatggtacttgctccaaacaagacactggcggctcagctttacagtgaa
atgaaggatttcttccccgagaatgcggtagaatattttgtttcctactacgattattac
cagcctgaggcttatgtcccgagttctgatacttttatagaaaaagatgcctcggtaaac
gagcatatcgaacaaatgcgcttatctgctactaaggctttgttggagcgacgggatgtg
atagtggttgcatctgtatcggctatttacggtttgggtgatccggatagttacttaaaa
atgatgctccacttgaccaatggtatgatcattgatcagcgttcaattctgcgacgtttg
gccgaactgcaatatacccgtaatgatcaggtatttcagcggggtacattcagagtacgt
ggtgaggtaattgatatctttccagctgaatctgatgagcatgccctgcgtgttgaattg
tttgatgatgaagtggaacggttgtcactgtttgatccattgacaggacaggttcaatac
aatgttccccggtatactgtttatccaaaaactcactatgttactccgcgtgagcgtatt
attcaggcgatggaacaaattaaaattgagcttgaacagcgacgaaaagtattgctggca
aatggtaagttactggaagaacagcgtattactcagcgtactcagtttgatttggaaatg
atgaatgaactgggttattgctctggtattgaaaactattcccgttacctttctggtcgt
accgaaggagaaccacctccaacattgtttgattacctcccagctgatggtttgctggtg
gtggatgaatcgcatgttactatcccgcaaatcggtgggatgtaccgaggagatcgttcc
cgtaaagaaacgttagtggaatatggtttccgtatgccttccgcactggataaccgacca
ttacgatttgaagaatttgaagcactagctccacagacaatttatgtttctgcgacacca
ggtaaatatgaactagaaaaatctgggggtgatgtggtggagcaagtggtgcgtcctact
ggtttacttgatcctgaagtggaggttcgcccggtaacaactcaggttgatgatctatta
tctgaaattcgcattcgggcggtgaaaaatgagcgggtgttagtcacgactctgactaag
agaatggcagaggatttaactgagtatttggaagaacacggtgagcgtgttcgttatttg
cactcagatattgataccgttgaacgggtggaaattatccgggaccttcgtttaggtgag
tttgatgtattggtaggcattaacttgctgagggaagggttggatatgccagaagtctct
ctggtggcaattcttgatgctgacaaagaaggttttctgcgttctgaacgttcattaatt
caaactattggacgtgccgctcgtaacctgcacggtaaagcgattctttatggcgataaa
atcacagattcaatggcgaaagcgattggtgaaacggaacgccgtcgtaccaagcagcaa
atatttaatgcagaacgcggtattgttccaaaaggtctgaataagaagatcggtgatatt
ttgcaaattggacagcctgctggcggtaaagggaaaaccaaaggcaaagcggttgccaca
acagaagcatttagcaagctatccgccaaagagttggaaaacaaaatccgcgagctggag
gcgaaaatgtaccagcatgcgcaggatcttgagttcgaattggcggccaatgttcgcgat
caggtgcaaatattgcgggagcagtttattgctaattcatga
DBGET
integrated database retrieval system
