Photorhabdus asymbiotica: PAU_03503
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Entry
PAU_03503 CDS
T00941
Symbol
sbcD
Name
(GenBank) nuclease sbccd subunit d
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pay
Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_03503 (sbcD)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAU_03503 (sbcD)
Archaeal homologous recombinant proteins
PAU_03503 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
CAQ85591
UniProt:
C7BK94
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All DBs
Position
4101254..4102720
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AA seq
488 aa
AA seq
DB search
MRQFYDRFMKSCLRYPSPAICFAIINLTIFIFHKKWEAARRYIHEIRLKNDIQITVVIIL
FHLNELRGIMRIIHTSDWHLGQYFFTKSRAAEHKHFLHWLVEQIKNYQVDALIVAGDVFD
TGSPPSYARELYNRFVVELQPTGCQLIILGGNHDSVATLNESKELLSCLNTTVIANAEEN
PQKQIKILNTQEGNAGAILCAIPFLRPRDIMTSQAGQSGEQKQLALQEAIAEHYNRLYRQ
ACELRDQLNIPLPVIATGHLTTIGASVTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHR
PQIVAKSEHIRYSGSPIPLSFDEVGQEKSLCLVEFAQGKLESIKLLPVPQYQPMQLIRGN
LQQIEQQLQTFNDYQGKQPVWLDIEVATQDYLHDIQKRIQSMVAELPVEVILLRRAKIQR
QNILTKENRETLTELSINEVFARRLEQTELNDEEHKKRLTTLFEQTLNEIYNRIDFKMHR
DGKGVNPR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagttttatgacagatttatgaaatcctgcctccgttatccctcacctgcaatc
tgtttcgcaataattaatttaaccatcttcatatttcataagaaatgggaagcggctcgg
agatatattcacgaaatcagattaaagaatgatatccagattacagtcgttataatcctc
tttcaccttaacgaattgcggggaattatgcgcattattcacacctctgactggcatctt
ggccaatatttttttacaaaaagccgagccgctgaacataaacattttctgcattggctg
gttgaacagattaaaaattaccaggtcgatgcattgattgttgctggagatgtgtttgat
accggctcaccacctagctacgcccgtgaattgtacaatcgctttgttgttgaactgcaa
cctactggctgtcagttaattatccttggcggtaatcatgactcagtagcaacgttgaac
gaatcaaaggaactactctcctgcctgaataccaccgttattgctaatgctgaagaaaat
ccacaaaaacagataaaaatactcaacactcaggaaggcaatgctggtgcaatcctctgt
gcaatcccttttctgcgaccaagggatattatgactagccaggcaggtcaatcaggcgaa
caaaaacagttggcattacaggaagccattgcagaacactataatcgactataccggcaa
gcctgtgaattacgtgatcaactaaatatacccttacctgtcattgctaccgggcatctg
accactattggcgcctctgtcacagattcagtccgggatatttatattggtacacttgat
gccttccctgcacaagcttttccaccggcagattatattgcactcgggcatattcaccgg
ccacaaatcgtcgcgaaatctgaacatatccgctatagcggctcccccattccactcagt
tttgatgaagtgggacaggagaaaagtctctgtttagtagaatttgctcaaggcaagctg
gaatccattaaacttttacccgttcctcaatatcagcctatgcaacttatcagaggcaac
ctgcaacaaattgagcaacagttacagacttttaatgattatcaaggtaagcaacctgtt
tggctggatattgaagttgcaacgcaagattacctccatgatatccaaaaacggattcaa
tccatggttgcagaacttccggtagaagtcattctgttacggcgagctaaaatacaacga
caaaatatactgacaaaagaaaacagagaaaccctaacagaactcagcattaacgaagtt
tttgcccggcggcttgagcaaacagaacttaacgatgaagaacataaaaaacgtctgacc
actcttttcgaacaaacactgaatgaaatctataaccgaatagatttcaagatgcatcgc
gacggcaagggagtgaatccccggtaa
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