Photorhabdus asymbiotica: PAU_03679
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Entry
PAU_03679 CDS
T00941
Symbol
rpoN
Name
(GenBank) rna polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
pay
Photorhabdus asymbiotica
Pathway
pay02020
Two-component system
pay02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PAU_03679 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PAU_03679 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pay03021
]
PAU_03679 (rpoN)
Transcription machinery [BR:
pay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PAU_03679 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CAQ85767
UniProt:
A0ABX9SNK7
C7BLR1
LinkDB
All DBs
Position
4281016..4282455
Genome browser
AA seq
479 aa
AA seq
DB search
MKQSLQLRLSQQLTMTPQLQQAIRLLQLSTLELQQEIQQALEMNPLLEQDEEHREIDSQE
SPDNDTEVMDTLEALQQKDLPDELPLDTSWDEIYTAGTPSGTRNDYSDDELPLYQGETTQ
TLQDYLMWQAGLTPFTETDAAIATSIIDSIDDTGYLTVPLEDILASIGDDQLTLAEIETV
LKRVQHFDPIGVAARDLKDCLLIQLSIFPPETPYLKEAKLIVCEHLELLGHRDFRNLIRL
SRLKEDTLKEVINLIQSLEPRPGLAVNTGESEYVIPDVLVRKESGHWQVELNADSIPRLR
INQHYAELGQHARHESDCQFIRNNLQEAKWLIKSLESRNDTLLKVTRCIVEQQQEFFEHG
EEHMKPMVLADIAFQVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTESGGEASST
AIRALVKKLVAAENPAKPLSDSKLTSMLTDQGIVVARRTVAKYRESLSIPPSNQRKRLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagtttgcaactcaggcttagtcagcaactgactatgacaccacaactccaa
caagccattcgtttgttgcaactttctacgcttgaacttcaacaagaaatacaacaagcg
ttagaaatgaatcctttgcttgagcaggacgaagaacaccgcgaaatcgacagtcaggaa
tctcctgacaacgacactgaagttatggatacgcttgaagccctgcaacaaaaggatctt
ccagacgagctaccactagatacaagctgggatgagatttacactgctggaacgccttct
ggtacacgtaatgactatagtgatgatgaattgccactttaccaaggcgagacaactcaa
accctgcaagactatttgatgtggcaagcagggctgacccctttcacggaaacggatgcc
gccattgccacatcaattattgactccatagatgatacaggttatctcactgtaccattg
gaagacatccttgccagtattggcgacgatcagctcactctggcagagatagaaacagta
ttaaaacgggtacagcattttgatcctatcggtgtcgcggcccgtgatctaaaagattgt
cttctgatccagctatcaatatttcccccagaaacaccttatctgaaagaagccaaattg
atcgtttgcgaacatctggagttgctgggtcatcgggatttccgtaatttaatccgcctt
agccgcttaaaagaagatacactgaaagaagtgataaatttaattcaatcacttgaacca
agacccggtctggcggtgaatacgggtgaatcggagtatgtgatccctgatgtgttagtt
cgaaaagagagtggacactggcaagtagaactgaatgcagatagcattcctcgtttacgt
attaatcagcattatgcggaactcggacaacatgcacgccatgaaagcgactgccaattt
attcgcaataacttacaggaagcgaaatggcttatcaaaagtctggaaagccgaaatgat
actttactgaaagtgacacgttgcattgtagaacagcagcaagaattttttgaacatggt
gaagaacatatgaaacccatggttctggcagacattgccttccaggttgatatgcatgaa
tctaccatttccagggtgactacccagaaattcctgcacagtccgcgtggtatttttgaa
ttgaagtattttttctccagccatgtcaatacagaaagtggaggcgaagcctcttctact
gcaatacgggctttggtgaaaaaactggtagcagcggaaaaccccgccaaaccattaagt
gacagcaaactgacgagcatgctgactgatcaaggtatcgtcgttgcccgacggactgtc
gcaaaatatcgagagtcgttatccattccgccatcaaaccaacgtaagcgtctggtttga
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integrated database retrieval system
