Photorhabdus asymbiotica: PAU_03873
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Entry
PAU_03873 CDS
T00941
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay00071
Fatty acid degradation
pay00280
Valine, leucine and isoleucine degradation
pay00310
Lysine degradation
pay00362
Benzoate degradation
pay00380
Tryptophan metabolism
pay00410
beta-Alanine metabolism
pay00640
Propanoate metabolism
pay00650
Butanoate metabolism
pay00907
Pinene, camphor and geraniol degradation
pay00930
Caprolactam degradation
pay01100
Metabolic pathways
pay01110
Biosynthesis of secondary metabolites
pay01120
Microbial metabolism in diverse environments
pay01200
Carbon metabolism
pay01212
Fatty acid metabolism
Module
pay_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PAU_03873 (fadB)
00650 Butanoate metabolism
PAU_03873 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PAU_03873 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PAU_03873 (fadB)
00310 Lysine degradation
PAU_03873 (fadB)
00380 Tryptophan metabolism
PAU_03873 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PAU_03873 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PAU_03873 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PAU_03873 (fadB)
00930 Caprolactam degradation
PAU_03873 (fadB)
Enzymes [BR:
pay01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PAU_03873 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PAU_03873 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PAU_03873 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PAU_03873 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CAQ85961
UniProt:
A0ABX9SP94
C7BNA6
LinkDB
All DBs
Position
4516403..4518589
Genome browser
AA seq
728 aa
AA seq
DB search
MLYQSETIQVNWLKDGIAELVFNAPAAINKLDTKTVASLDKAVAILEQQTELKGVLLRSE
KAAFIVGADITEFLSLFDSPVEKLQEWLDFSNNIFNRIEDLPVPTISAINGYALGGGCEC
VLSTDFRVASPDVRIGLPETKLGIMPGFGGSVRLPRLIGTDNALDIIAAGKDIGAEEALK
NGLIDAVVSNEKLINSAVSMLEQAIAGDLDWKAARQPKLEPLKLNEIERAMSFNVAKGMV
MKVAGPHYPAPITAVKSIEKSATFGRDEALKQETASFIPLAQTNVARALVGIFLNDQYIK
GLAKKHLKEVTTPEYAAVLGAGIMGGGIAYQSARKGIPVMMKDISQQALELGMIEAAKLL
NKQFERGRLDPIKMALTLSSIQPTLNYAGIEQAQIVVEAVVENPKIKAAVLSETENLVNE
DCILASNTSTIPISELANSLKRPENFCGMHFFNPVHRMPLVEIIRGAKTSEKTISTVVAY
ASKIGKTPIVVNDCPGFFVNRVLLPYLLGFGLLLRDGGDFRQIDKIMEKEFGWPMGPAYL
IDVIGLDTAHHAQSVMAQGFPDRMQRDYKDAIDVLYDNQRYGQKNGIGFYKYTQDKKGKP
KKEQDEQTDQLLATICQPKNNFSGEEIIARTMIPMINEVVRCLEEGVIASPAEADMALVY
GLGFPPFRGGVFRYLETMGTAAYVKMAENYAHLGALYQVPPGLKAKAERNESYYPTAATI
AVSTGTTA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcaaagtgaaacaattcaagtaaactggctgaaagatggcattgctgagcta
gtcttcaatgccccagccgctattaataaactggataccaaaactgttgcatctctggat
aaggctgtcgctatcctggagcaacaaactgaactgaaaggcgttttattacgttctgag
aaagccgcatttattgttggtgcggatattactgaatttctctctttattcgattcaccc
gtagaaaaactgcaagaatggcttgatttctcaaataacatttttaatcggatagaagat
ttacccgttccaaccatttctgcaataaatggttatgctcttggtggcggttgtgaatgc
gttctatctacagatttccgtgtagcctcccctgacgtacgcattggactgccagaaacc
aagcttggtattatgcctggtttcggtggctcagttcgccttccacgccttatcgggaca
gataatgcactggatatcatcgccgcaggtaaagatattggtgcggaagaagcattgaaa
aatggccttattgatgccgttgtttctaatgaaaaactgattaattctgcagtttccatg
ctggaacaggctattgcaggagaccttgattggaaagcagcacgccagccaaaattagag
cctttaaagctcaatgaaatcgaacgtgctatgagttttaatgtggcaaaaggcatggtg
atgaaagttgccggtccacactacccagcccccatcactgctgttaaatccatagaaaaa
tcggctacatttggtcgtgatgaagcactgaaacaagaaactgccagctttattcctctg
gctcagacaaatgtcgcccgtgctttagtcggtattttccttaatgaccagtatataaaa
gggctggcgaaaaaacatctgaaagaggtcacaacacctgaatatgctgccgttctaggc
gctggaattatgggtggcggcattgcctatcaatctgcccgcaaagggattcctgtcatg
atgaaagacatcagtcagcaggctcttgagttaggcatgattgaagcggcaaaacttcta
aacaaacagtttgaacgtggtcgtctagaccccataaaaatggctctaaccctctcttct
attcaacctacactaaattatgccggtatcgagcaagctcaaatcgtagttgaagcagta
gtagagaatcctaagatcaaagcagctgtactatcagaaactgaaaatttggttaatgaa
gattgtatcctggcatccaacacttcaacaattccaatttcagaattagctaactcccta
aaacgcccggaaaacttctgtggtatgcacttctttaacccggtacatcgtatgccgttg
gttgaaatcattcgtggtgcaaaaacctctgaaaagacaatttcaactgtagttgcctac
gccagtaaaatagggaaaactcctatcgtcgttaatgactgtccgggattctttgtaaac
agagtacttctaccttatctcctcggcttcggtcttctattacgtgatggtggcgatttc
cgtcaaatagataaaatcatggagaaagaatttggttggccaatgggtcctgcttatctt
atcgacgttattggtcttgatactgcacatcatgctcaatcagtcatggcccaaggattc
ccagatcgtatgcagcgtgattataaagatgccattgatgttttatatgacaatcaacgt
tacgggcagaaaaatggtatcggtttctataagtatacgcaggataagaaaggcaaacct
aaaaaagagcaagacgagcaaacagatcaacttctggcaaccatctgccaaccgaagaat
aatttctccggtgaggagatcattgcccgtacgatgatcccaatgatcaacgaagttgtc
cgttgtttggaagaaggtgtcattgccagcccagcagaagctgatatggctctagtctat
ggcctcggcttccctccgttccgtggtggcgttttccgttatctggaaacgatgggaaca
gcagcttacgtaaaaatggctgaaaattatgctcacctcggtgctctttatcaggtacca
cctggtctgaaagccaaagctgaacgtaatgaaagttactaccctacagcagcaacgatt
gctgtcagcaccggaacaacagcgtga
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