Photorhabdus asymbiotica: PAU_04027
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Entry
PAU_04027 CDS
T00941
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pay
Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pay03016
]
PAU_04027 (truB)
Enzymes [BR:
pay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PAU_04027 (truB)
Transfer RNA biogenesis [BR:
pay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAU_04027 (truB)
Prokaryotic type
PAU_04027 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CAQ86115
UniProt:
B6VLH0
LinkDB
All DBs
Position
complement(4690688..4691635)
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AA seq
315 aa
AA seq
DB search
MGRRRRGRDIHGVLLLDKPQDISSNDALQKVKRIFNASKAGHTGALDPLATGMLPVCLGE
ATKFSQFLLDSDKRYRVVARLGQRTDTSDSHGQIISERAILLNQAQLDTALNKFRGNTMQ
IPSMYSALKHQGKPLYEYARQGIEVEREARPITVYELQFIRWVEDELELEIHCSKGTYIR
TIIDDLGELLGCGAHVIYLRRLQVANYPNDRMVTLEQLYELQNQAEDREIPVGELIDPLL
LPMDSAVAHFPEVNLLPVVASYFKQGQAVRSAKSSALVESMVRVTEGDERKFIGIAAIND
DGLVAPRRLVVESRD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcgtcgtcgcggtcgcgatatacatggtgtgctgttactggataagccgcaa
gacatttcttctaatgatgcactgcaaaaagtaaaacgtattttcaatgccagcaaggct
ggtcacactggtgcgttggacccattggcaacgggtatgctgccggtttgcctcggtgaa
gcgactaaattttcccagttcttacttgattccgacaagcgttaccgggtggtagcccgc
cttggtcagcgaactgacacatctgattcacatgggcaaatcatcagtgaaagagcaatc
ctgttaaatcaggcacaacttgatacagctttgaataaatttcgtggtaataccatgcaa
attccctctatgtattctgcactgaaacatcaggggaaaccactgtatgaatatgcccgt
cagggtattgaagtagaacgagaagctcggccaattacggtttatgaattacagtttatc
cgttgggtagaggatgagctggaattggagatacattgttcgaaaggaacttatattcgt
actattattgatgacttaggcgagttattaggttgtggtgctcacgttatttatttacgc
cgtttacaggtagcaaattacccaaatgatcgaatggtgacacttgagcaattatatgaa
ttgcaaaatcaggctgaagatcgggaaatacctgtgggagaattaattgatccattgtta
ttgccaatggatagtgcagttgctcattttcctgaagttaatttacttcctgtcgttgcg
tcttatttcaaacaaggtcaagctgtgcgaagtgcaaaatcttcggctctggttgaaagt
atggtgcgtgtaactgaaggtgatgaaaggaaattcatcggcattgctgctattaatgat
gatggtcttgtcgctccccgtcgtttggttgttgaaagcagggactag
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