Photorhabdus asymbiotica: PAU_04111
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Entry
PAU_04111 CDS
T00941
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAU_04111 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pay03019
]
PAU_04111 (recQ)
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_04111 (recQ)
Enzymes [BR:
pay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAU_04111 (recQ)
Messenger RNA biogenesis [BR:
pay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PAU_04111 (recQ)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PAU_04111 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAQ86199
UniProt:
B6VLQ4
LinkDB
All DBs
Position
complement(4775266..4777092)
Genome browser
AA seq
608 aa
AA seq
DB search
MSTAEVINTISLTEQVLRETFGYQQFRPGQQQVINTILEGRDCLVIMPTGGGKSLCYQIP
ALIQEGVTLVVSPLISLMKDQVDQLQANGVAADCLNSTQAREQQIDVIRRCRQGMVKLLY
IAPERLMMDNFLEQLLEWQPAILAVDEAHCISQWGHDFRPEYRALGQLRQRFPTLPVIAL
TATADETTRNDIVRLLNLNNPLIHISSFDRPNIRYTLIEKYKPLDQLWLFIRAQKGKSGI
IYCNSRSKVEETSERLQKRGLSVAPYHAGLDNNQRARVQDAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFNIPRNIESYYQETGRAGRDGLPAEAVLFYDPADMVWLRRCLEEKPVGTQ
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGENKQNLCGNCDICLDPPKNYDGLVDAQKAL
SCVYRVGQRFGIGYIVEVLRGSNNQRIRDMGHDRLPVYGIGKEQSQEYWISVLRQLIHLG
FISQNITNYSALQLTEAARPVLRGEVLLKLAVPRIQSLKGRSQQSKSYSGNYDRKLFAKL
RKLRKSIADENNIPPFVVFNDVTLIEMSEQCPVTADEMLLINGVGQRKLERFGGVFMALI
HEHLEEFK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaccgcagaagtcatcaatacgatatcactgacagagcaggtattgcgggaaacc
tttggttatcagcaatttcggcctggtcagcaacaagttatcaataccattcttgaaggg
cgtgattgtctggttattatgccgacggggggtggtaaatcattgtgttaccaaattccg
gcactgatacaggaaggcgtcacgttggttgtttccccattgatctctttgatgaaagat
caggtggatcaattgcaggcgaatggtgttgctgctgattgtttgaattcaactcaggct
cgcgaacagcagattgatgtgatccgacgttgtcgtcaggggatggtcaaattgctgtat
atcgctcctgaacgcttgatgatggataacttccttgagcaacttctggaatggcaacca
gctatactggcggtggatgaagcacattgtatttcacaatggggccatgattttcggcct
gaatatcgggcgttgggtcagctcaggcaacggtttccaacattgcctgtcattgcgttg
accgcgaccgctgatgaaaccacccgtaatgatatcgtccgactactgaaccttaataat
ccgcttatccatatcagcagctttgatcgccctaatattcgttataccttgatagagaaa
tacaagccattagatcaattatggctatttatccgtgctcagaaaggtaaaagtggcatc
atttactgcaacagtcgtagtaaagttgaagaaacgtcagagcgcttacaaaaacgtggc
ttaagtgttgcaccatatcatgctggtctagataacaaccaacgtgctcgggtacaggat
gcatttcaacgtgatgatttgcaggtagttgtggcaacagtcgcgtttggtatgggaatt
aataaacccaatgttcggtttgtggttcattttaatattccacgtaacattgaatcctat
tatcaggagacagggcgtgccggacgtgatggcctacctgcggaagcggtgttgttctat
gatcccgctgatatggtatggcttcgccgttgtttggaagaaaaacctgttggcacacaa
caggatattgaacggcataaacttaatgcaatgggcgcttttgctgaagcacaaacttgc
cgccgcttggtattgctgaattattttggtgaaaataagcaaaacctttgcggcaactgt
gatatttgccttgatccacctaaaaattatgatggtctggtggatgcgcaaaaagcgctt
tcttgtgtttaccgggttggtcagcgttttggtatcggttatatcgttgaagtgctcaga
ggctcgaataatcaacgtatccgtgatatggggcatgaccgtttgccagtttatggtatt
ggtaaagagcaaagtcaggagtattggatcagtgtattgcggcaactgattcacttaggc
tttatcagtcaaaacatcaccaattattcagcattacaattaacagaagcagcacgacca
gtattgcgtggtgaggttctgctgaaactggctgttccacgaatacagagtctgaaagga
cgcagtcagcaaagtaaatcttatagtggtaattacgatcgcaagctgtttgctaagctg
cgtaaattacgaaaatcgattgctgacgaaaataatatccctccttttgttgtatttaac
gatgtcactttgattgaaatgtcagagcaatgcccggtcactgctgatgaaatgttatta
attaacggagtagggcaacggaaacttgaacgttttggtggtgtttttatggcgttgatc
catgaacatctggaggaattcaaatag
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