Photorhabdus asymbiotica: PAU_04397
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Entry
PAU_04397 CDS
T00941
Symbol
trmE
Name
(GenBank) trna modification gtpase trme
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pay
Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pay03016
]
PAU_04397 (trmE)
Transfer RNA biogenesis [BR:
pay03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PAU_04397 (trmE)
Prokaryotic type
Methyltransferases
PAU_04397 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Ras
Dynamin_N
AIG1
Arf
Roc
Gtr1_RagA
GTP_EFTU
SRPRB
ABC_tran
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAQ86484
UniProt:
C7BT50
LinkDB
All DBs
Position
complement(5060327..5061691)
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AA seq
454 aa
AA seq
DB search
MNTTDTIVAQATPPGRGGVGILRVSGPKAAQVAEVVLGKLPKPRYADYLPFRDVDNRVLD
QGIAIYFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIANPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAMNSLQGAFSTQVHQMVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEANLDNVIAKLDRVRSQARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRD
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDSTTTDAVEPVEIWPEFMARLPESLPITVVRNKTDMTNEETSITEVRGYSLIRLSAH
SGEGIDLLRDHLKETMGFNSNTEGGFLARRRHLQALNTAAEHLQQGHEQLVVARSGELLA
EELRLAQQTLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaccgatacgatagtcgctcaggctaccccgccaggacggggtggtgttggc
atcttacgtgtttcaggcccgaaagcagcacaagtggctgaggtggtattaggtaagtta
cccaagccccgttatgcggattatctgccatttcgtgatgtagataatcgggtactcgat
cagggaattgcgatttactttccgggacctaattcctttacgggggaagatgtactggag
cttcaagggcacggtggaccggttattcttgatttactgttgaagcgtattctgacccta
cctggtgtacgcatcgctaatcctggtgagttttctgaacgtgcttttcttaatgacaaa
ctggacctggctcaggcggaggccattgctgacctgattgatgctagttcggagcaggcg
gcccgttcagcgatgaattctttacagggcgctttttctacccaagttcatcagatggtg
gaagcacttactcacttgcgaatttatgtagaggctgcgattgattttcctgatgaagag
atcgatttcctttctgatgggaaaattgaagccaatctggataacgtcatcgctaagctt
gatcgtgtacgttctcaggctcgtcagggtagccttttgcgtgaagggatgaaagttgtt
atcgcaggccggcctaatgctgggaaatcgagcctgcttaatgcgttagcgggtcgtgac
gctgcgattgttaccgatattgccggtacaacccgtgatgtactgcgtgaacatatccat
attgacggtatgccgctgcatatcattgatactgcgggtctgcgtgaagccagtgatgaa
gtggaacgtattggtattgaacgcgcatggcaggaaattgaacaggctgatcgcgtattg
tttatggtagacagtacgacaactgatgcggttgagccagtagaaatctggcctgaattt
atggctcgtttgccggaatcactgcctatcactgttgtccgcaataaaacggatatgact
aatgaagagacgagtattactgaagtgagaggttactcgctaatccgcctttctgctcat
agtggtgaaggaatcgatttgctccgcgatcatctaaaggaaactatgggtttcaacagc
aatacggaagggggttttctggctcgtcgtcgtcatttacaggcattaaataccgcggca
gagcatttacaacaaggtcatgaacagttggtggttgctcgctcaggtgaattgttggca
gaagaactgcgtttggcacaacagacactgagtgagatcacgggtgaattcacttctgat
gatttgcttggaaggattttttcgagtttttgtattgggaagtga
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