Paenibacillus sp. YPG26: LDO05_00145
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Entry
LDO05_00145 CDS
T11186
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
payg Paenibacillus sp. YPG26
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LDO05_00145 (rnmV)
Enzymes [BR:
payg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
LDO05_00145 (rnmV)
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GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
USB33295
LinkDB
All DBs
Position
30477..31022
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AA seq
181 aa
AA seq
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MIKEVIVVEGRDDTVAVKRAVEADTIETGGSAIGPAVIRKIKLAQERRGVIILTDPDHAG
ERIRKIVAAKVPGCKHAFLTEAEATYRGDIGVENASPETIREALSRVRSEYTGDETLIEF
SDLIEAGLIVHPNAAARRHFMGELLGIGYCNGKQFFKRLRIFQISREEFAAALHQLENKG
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggaggtcattgtagtagaaggccgggacgatacggttgccgtcaagagagcg
gtagaggccgatacgattgagactggcgggtcagccattggtccggctgtcattagaaag
atcaagctcgcacaagagcgcaggggtgttattattctaacagacccggatcatgccgga
gagcggatccgcaagattgtggctgcgaaggtgcccggatgcaagcatgccttcctgaca
gaggcggaggcgacctaccggggagatatcggggtggagaacgcctcacctgagacgatc
cgtgaggcgctgtcccgggtacgcagtgagtatacgggagatgagacgcttattgaattc
agtgacctcattgaggcggggttaattgtgcatcctaatgctgccgcaagacgccacttc
atgggtgagctgctgggaataggttactgtaacgggaagcagttctttaagcgcctgcgt
atctttcagatcagcagggaggaattcgctgcagcccttcatcaattagagaacaaagga
gtataa
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