Paenibacillus sp. YPG26: LDO05_00405
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Entry
LDO05_00405 CDS
T11186
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00550
Peptidoglycan biosynthesis
payg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LDO05_00405
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
payg01002
]
LDO05_00405
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
payg01011
]
LDO05_00405
Enzymes [BR:
payg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LDO05_00405
Peptidases and inhibitors [BR:
payg01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LDO05_00405
Peptidoglycan biosynthesis and degradation proteins [BR:
payg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LDO05_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
USB33342
LinkDB
All DBs
Position
85499..86869
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AA seq
456 aa
AA seq
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MNTTKPKRRILRKSVTSLLMINMLCLSVIPAITLAEGQAIAAPSTKSTTEAKAAADKLGL
NVKSAILIEATTGQVLYSVNGDEAMPPASMTKMMTEYIVAEQVKQGKLKWTDVVTVKDNA
AKQIGSRVFLAEGDQHTVEELYIAMAIASANDATVALAERVGGTEQEFVKMMNAEAKRMG
MKTAYFANSTGLNVGDMPEGYRPENPEETVMSAQDAATLAKYIVTDHPDFTRFTTLQSYK
FRERDKTPLVNLDWMLEANKSNINFKQYAYPGLDGLKTGHTESAGNCFTGTAVRNGVRLI
SVVMGTDAKSQKSRFVETKKLLDYGFDNFEVKQVIAPKTTVKGAEQVSVKKATNSDVPVV
TDQAVSFVVQKGADLKGIKSTVKWLDKDKLTAPLPKGTKVGTVTYTYKADDASAPAEKTV
NLITAEEAEKAGWFKLLLRAIGQFFVDLFNAIKNLF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacgaaacctaaacggcgtatccttcgcaaaagtgtaacgtcgcttttgatg
attaatatgttgtgcttgtccgttattcctgctataactctagccgaaggacaagccatc
gctgcgccaagcactaaatctactacagaagcaaaggcagctgcagataaattaggacta
aatgtaaaatcagccattctaattgaagcaactaccggacaggtcttgtactctgtaaat
ggggacgaagctatgccaccggcaagcatgaccaagatgatgacggaatatattgttgcc
gagcaggtgaaacagggcaagcttaaatggaccgacgttgttactgttaaagacaacgca
gcaaagcagatcggttcacgtgtcttccttgcagaaggagaccagcacaccgtggaagag
ctctatatcgccatggctatcgcttccgccaatgacgccactgttgcacttgcagagcgt
gtagggggcacagagcaagagttcgttaagatgatgaatgcagaagcgaagcgtatgggc
atgaagacagcctattttgccaattccacaggtcttaatgtaggggatatgccggagggc
taccgcccggagaatccggaggagacggttatgtctgctcaggacgcggcaacgctggct
aaatatatcgtaacggatcacccggatttcactcgatttactacgctgcaatcatataaa
ttccgcgaacgcgataagactccattggtgaatctggattggatgctggaagcaaataag
tcgaatattaacttcaagcagtatgcctaccccgggttggatgggctgaagacagggcat
accgagagtgcagggaactgcttcacaggtactgcggtacgaaatggtgtccgtcttatt
agtgtagttatggggacggatgcgaaatcgcagaaatcccgttttgtagagaccaagaag
ctgctggattatggctttgataactttgaggtcaaacaagtcattgctccaaaaaccaca
gttaaaggtgccgagcaagttagtgtgaagaaggcaaccaattctgatgttcctgtagtt
acagaccaggctgtaagctttgtcgtacagaagggtgctgaccttaaaggaattaaatct
accgtaaaatggctcgataaggacaagctgacggctccactgccaaaaggcactaaagtt
gggaccgtaacctatacctacaaagccgacgacgcctcggctccggcagagaagaccgtt
aatctgatcactgctgaggaagcagagaaggcaggctggttcaagctgctgcttcgggca
attggccaattctttgtagatctgttcaatgcgatcaagaatttgttctag
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