Paenibacillus sp. YPG26: LDO05_00410
Help
Entry
LDO05_00410 CDS
T11186
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00750
Vitamin B6 metabolism
payg01100
Metabolic pathways
payg01240
Biosynthesis of cofactors
Module
payg_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LDO05_00410 (pdxS)
Enzymes [BR:
payg01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LDO05_00410 (pdxS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
USB33343
LinkDB
All DBs
Position
87050..87931
Genome browser
AA seq
293 aa
AA seq
DB search
METGTSRVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGATAVMALERVPSDIRAAGGVARM
ADPTIVEEVMKVVTIPVMAKARIGHFVEAKVLESLGVDYLDESEVLTPADEVYHIDKREF
TVPFVCGAKDLGEALRRIGEGASMIRTKGEPGTGNIVEAVRHMRLINSQIRKITNMSKDE
LYAEAKNLGVAYDLLLEVHQNGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKS
EYPEKFARAIVEATTHYTDYKLIAEVSKNIGTPMKGIEISKLTAAERMSDRGW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggaacatctcgtgtaaaaagaggtatggctgaaatgcaaaaaggtggcgtc
attatggacgtcatgaacgctgagcaagctaagattgccgaggctgctggcgcaacagca
gttatggcgcttgagcgtgtaccatctgatattcgcgctgctggcggggttgcccgtatg
gctgatcctaccattgtggaagaggttatgaaggtggtaaccattccggttatggccaag
gcgcgtattggacacttcgttgaagctaaggtacttgagtcccttggcgttgactatctc
gatgagagtgaagtgcttactccggctgatgaagtatatcacatcgacaagcgcgagttc
acagttccatttgtatgtggagctaaagaccttggagaggctcttcgccgtattggagaa
ggtgcatccatgatccgtaccaaaggtgaaccgggaacaggcaacatcgttgaagcggta
cgtcacatgcgtctgatcaatagccaaatccgcaagattaccaatatgtcgaaggacgag
ctgtatgcagaagccaagaaccttggcgtagcttatgacctcctgcttgaagttcaccag
aacggtaagcttccagtcgttaactttgctgccggtggtgtggctactcctgcagatgca
gccttgatgatgcacttaggcgcagacggcgtattcgtaggctctggtattttcaaatcc
gagtatccagagaaattcgcacgcgctattgttgaagcgacaactcattatacagactac
aaattgattgctgaagtctccaagaacatcggtactccgatgaaagggatcgaaatctcc
aaattgactgctgctgagcgaatgagtgaccggggctggtaa
DBGET
integrated database retrieval system
