Paenibacillus sp. YPG26: LDO05_04145
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Entry
LDO05_04145 CDS
T11186
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00521
Streptomycin biosynthesis
payg00523
Polyketide sugar unit biosynthesis
payg00541
Biosynthesis of various nucleotide sugars
payg01100
Metabolic pathways
payg01110
Biosynthesis of secondary metabolites
payg01250
Biosynthesis of nucleotide sugars
Module
payg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LDO05_04145 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LDO05_04145 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LDO05_04145 (rfbC)
Enzymes [BR:
payg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LDO05_04145 (rfbC)
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NCBI-ProteinID:
USB34022
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Position
915816..916367
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AA seq
183 aa
AA seq
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MRVIDTGLPGAVIIETDVFEDERGFFTESYNREVFAKHGITYNFIQDNHSYSGPAGTLRG
LHYQLQPKAQTKLVRVLSGAIYDVFVDLRKESPTFGKWGEVILTSRNFRQVLIPRGFAHG
FCTLVPHTEVLYKVDEVYSKEHDRGILWNDPALAIPWPATKLVLSEKDKVHPVMAKADFD
FSY
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcatcgatacagggctgccgggggcggtcatcatagagaccgatgtgttcgag
gatgaacgtggtttttttacagagagctataaccgggaagtcttcgcgaagcatggaatc
acttataacttcattcaagataatcactcctattctgggcctgccggtacactgagaggc
ctgcattatcagcttcagcccaaagcacagaccaagctggtccgggtactgtcaggagca
atctatgatgtattcgtagatcttcgtaaggagtcccctaccttcggtaagtggggggag
gtcatcttgacctcacggaatttcagacaggttctgattccccgcggcttcgcacatgga
ttctgcacactcgtgccacataccgaagtgttgtacaaagtggatgaggtctattccaag
gaacatgaccgggggattctctggaatgatccggcacttgcgattccttggccggccacg
aagcttgtgttatcggagaaggataaggtgcatccggtgatggccaaggccgattttgac
ttctcatactaa
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