Paenibacillus sp. YPG26: LDO05_07530
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Entry
LDO05_07530 CDS
T11186
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00300
Lysine biosynthesis
payg00470
D-Amino acid metabolism
payg01100
Metabolic pathways
payg01110
Biosynthesis of secondary metabolites
payg01120
Microbial metabolism in diverse environments
payg01230
Biosynthesis of amino acids
Module
payg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LDO05_07530 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDO05_07530 (dapF)
Enzymes [BR:
payg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LDO05_07530 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
USB34601
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Position
1619048..1619881
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AA seq
277 aa
AA seq
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MEFTKMHGLGNDFLVFHGHQNLPDNVSDLAVKWCDRFFGVGGDGLVFILPSEQADFRMRI
INSDGSEAEQCGNAIRCVAKYVYDNKLTDKENITIETLGAGVQPVSLKVVNGVVQTVRVD
MGEPILDGLTVPTTLEGNPVLDHPIEADGREFNFTAVSMGNPHCVIYVDDAPHFDLETWG
PKLEVHPYFPRKINVEFATVTSRDRVEMRVWERGAGPTLACGTGACATLVSSVLNGVTDR
AAWIGLKGGDLYIEWNAEDNHVYMTGPAAAVYQGSIE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacaaaaatgcacggactcggcaacgactttctggtcttccacggacaccag
aatttgccggataatgtgagtgaccttgcagtgaagtggtgtgaccggttcttcggtgtg
ggcggggatggacttgtattcattctgccatctgagcaagccgacttccggatgcggatt
attaactccgacggctctgaagccgagcagtgcgggaacgccatccgctgtgtggccaaa
tatgtgtatgataacaaattaacagataaagaaaatattacgattgagacgctgggagcc
ggcgttcagccggttagcttgaaggtcgtgaacggggttgtgcagacggttagggtggat
atgggcgaacctattctggatggcctgactgttcctaccacgctggaaggcaatccggtt
cttgatcatccgattgaagcggatgggcgcgaatttaattttaccgccgtatctatgggc
aacccgcactgtgtgatttatgtggatgacgcgccccatttcgatctggagacatggggg
ccgaagctggaagtccacccgtactttcctcgcaaaatcaatgtggagttcgctaccgtc
acctcccgtgaccgcgttgagatgcgggtatgggagcgaggagcggggccgacgctggcc
tgtggtacgggtgcatgcgcaaccttagtctcctccgttctgaacggggtaaccgaccgg
gcagcctggatcggtctcaaaggtggagacctgtacattgaatggaacgcggaagacaac
catgtctatatgaccgggcctgcagctgcagtctaccaggggtctatcgaataa
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